RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 CTRB2Q6GPI1 263 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 ATRAIDQ6UW56 229 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 OR2W3Q7Z3T1 314 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 PHYHIPLQ96FC7 376 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 MRPL13Q9BYD1 178 aaKnown RBP12.92□□□□□ -0.34
MSH5-201ENST00000375703 TGIF2Q9GZN2 237 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 GAREM1Q9H706 876 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 BARX1Q9HBU1 254 aaPredicted RBP12.92□□□□□ -0.34
MSH5-201ENST00000375703 SDHAF3Q9NRP4 125 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 KLRF1Q9NZS2 232 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 POLR1DQ9Y2S0 133 aa12.92□□□□□ -0.34
MSH5-201ENST00000375703 C5orf51A6NDU8 294 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 TMEM14DPA8MWL7 114 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 F5H0A9 414 aaPredicted RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 SSX5O60225 188 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 MTRF1O75570 445 aaKnown RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 GIMD1P0DJR0 217 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 CLRN1P58418 232 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 PTCRAQ6ISU1 281 aaPredicted RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 ZNF529Q6P280 563 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 FAM122CQ6P4D5 195 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 RNF144BQ7Z419 303 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 COMMD2Q86X83 199 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 KMT5CQ86Y97 462 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 OR2AJ1Q8NGZ0 328 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 OR4K15Q8NH41 348 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 NICN1Q9BSH3 213 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 PPP4R1LQ9P1A2 415 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 KLHL13Q9P2N7 655 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 B3GAT1Q9P2W7 334 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 C13orf42A0A1B0GVH6 325 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 DUS4LO95620 317 aaKnown RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 CHRM2P08172 466 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 ABOP16442 354 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 TBPP20226 339 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 CASRP41180 1078 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 ZNF41P51814 821 aaPredicted RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 FOXK1P85037 733 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 MYBPHQ13203 477 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 SNTB1Q13884 538 aaKnown RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 INPP5JQ15735 1006 aaPredicted RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 SMAD2Q15796 467 aaKnown RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 PAN3Q58A45 887 aaKnown RBP12.91□□□□□ -0.34
MSH5-201ENST00000375703 GLIPR1L1Q6UWM5 242 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 RTN4RL2Q86UN3 420 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 TMEM17Q86X19 198 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 UEVLDQ8IX04 471 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 NUBPLQ8TB37 319 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 MARCH1Q8TCQ1 289 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 FANCFQ9NPI8 374 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 FBLN5Q9UBX5 448 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 CA14Q9ULX7 337 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 BRWD1Q9NSI6 2320 aa12.91□□□□□ -0.34
MSH5-201ENST00000375703 SULT2B1O00204 365 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 DEFA5Q01523 94 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 RHBDD2Q6NTF9 364 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 SLC25A45Q8N413 288 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 TMEM185AQ8NFB2 350 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 OR52H1Q8NGJ2 320 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 OR2I1PQ8NGU4 316 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 NUDT16L1Q9BRJ7 211 aaKnown RBP12.9□□□□□ -0.34
MSH5-201ENST00000375703 CHRDQ9H2X0 955 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 FN3KRPQ9HA64 309 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 MBD2Q9UBB5 411 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 HRH3Q9Y5N1 445 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 TRIOO75962 3097 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 TRBV11-1A0A0K0K1C0 115 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 A0A1W2PNV4 684 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 ATP6V1G2-DDX39BF2Z307 99 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 TOR1AO14656 332 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 SIGLEC5O15389 551 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 GP1BAP07359 652 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 SRFP11831 508 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 CDAP32320 146 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 SIGLEC14Q08ET2 396 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 UNQ6126/PRO20091Q6UXV3 157 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 ELP5Q8TE02 316 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 TMEM41AQ96HV5 264 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 LPAR5Q9H1C0 372 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 PISDQ9UG56 409 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 SRPK3Q9UPE1 567 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 MRPS28Q9Y2Q9 187 aaKnown RBP12.9□□□□□ -0.34
MSH5-201ENST00000375703 UNC13CQ8NB66 2214 aa12.9□□□□□ -0.34
MSH5-201ENST00000375703 ZNF878C9JN71 531 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 MPIG6BO95866 241 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 SLC2A1P11166 492 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 BCKDHBP21953 392 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 PSMB6P28072 239 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 MFAP5Q13361 173 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 WDR74Q6RFH5 385 aaPredicted RBP12.9□□□□□ -0.35
MSH5-201ENST00000375703 ABHD12BQ7Z5M8 362 aaPredicted RBP12.9□□□□□ -0.35
MSH5-201ENST00000375703 HOGA1Q86XE5 327 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 SLC38A9Q8NBW4 561 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 TERB2Q8NHR7 220 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 LRRC46Q96FV0 321 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 SOX7Q9BT81 388 aa12.9□□□□□ -0.35
MSH5-201ENST00000375703 CEP290O15078 2479 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms