RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 NR0B1P51843 470 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 ZNF528Q3MIS6 628 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 GPR119Q8TDV5 335 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 ADIPOR1Q96A54 375 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 CNTNAP3BQ96NU0 1288 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 NICN1Q9BSH3 213 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 TEX13DA0A0J9YY54 714 aaPredicted RBP12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 A0A1W2PR77 199 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 PLPP3O14495 311 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 NUDT21O43809 227 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 ADAP1O75689 374 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 DXOO77932 396 aaKnown RBP12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 VSIG8P0DPA2 414 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 ZNF823P16415 610 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 RORAP35398 523 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC6A8P48029 635 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 KCNJ3P48549 501 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 PHF19Q5T6S3 580 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 C1orf140Q5VVS0 124 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 NUP54Q7Z3B4 507 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 ARL11Q969Q4 196 aa12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 ADAT3Q96EY9 351 aaPredicted RBP12.57□□□□□ -0.4
CLCNKA-202ENST00000375692 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 FAM157CP0CG43 387 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 IL12BP29460 328 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 B2MP61769 119 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC9A3R2Q15599 337 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 DHRS7BQ6IAN0 325 aaPredicted RBP12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 SPAG16Q8N0X2 631 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC30A7Q8NEW0 376 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 ST7LQ8TDW4 575 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC46A1Q96NT5 459 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 LRRC61Q9BV99 259 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 HRH4Q9H3N8 390 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 OR2S2Q9NQN1 319 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 TMEM100Q9NV29 134 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 COA4Q9NYJ1 87 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 ATXN7L1Q9ULK2 861 aaPredicted RBP12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 DBX1A6NMT0 343 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 H0YIG0 161 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 CRYBA1P05813 215 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 SPP1P10451 314 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 RAB6AP20340 208 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 NPY4RP50391 375 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 DCDP81605 110 aaKnown RBP12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 QRFPP83859 136 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 SGCAQ16586 387 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 MST1LQ2TV78 715 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 C10orf91Q5T1B1 145 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 COX15Q7KZN9 410 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 PRSS58Q8IYP2 241 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 CADM4Q8NFZ8 388 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 SLC26A10Q8NG04 563 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 RNF141Q8WVD5 230 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 PTX4Q96A99 478 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 TBL1XR1Q9BZK7 514 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 LANCL2Q9NS86 450 aa12.56□□□□□ -0.4
CLCNKA-202ENST00000375692 FRG2CA6NGY1 282 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 OR5K4A6NMS3 321 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 FARS2O95363 451 aaKnown RBP12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 ISG15P05161 165 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 RFC3P40938 356 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 OR13C9Q8NGT0 318 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 OR4K15Q8NH41 348 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 UQCC1Q9NVA1 299 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 SOHLH2Q9NX45 425 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 OR5AC2Q9NZP5 309 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 CARHSP1Q9Y2V2 147 aaKnown RBP12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 LRP4O75096 1905 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 BLACEA4D250 179 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 C2orf72A6NCS6 295 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 LINC01387J3KSC0 135 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 NPIPB7O75200 414 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 MT-ATP6P00846 226 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 PGCP20142 388 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 MPZP25189 248 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 CBX5P45973 191 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 EFNA3P52797 238 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 MICBQ29980 383 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 ZNF585AQ6P3V2 769 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 ZNF704Q6ZNC4 412 aaPredicted RBP12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 RXFP4Q8TDU9 374 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 ZNF721Q8TF20 911 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 CTSFQ9UBX1 484 aa12.55□□□□□ -0.4
CLCNKA-202ENST00000375692 DDAH2O95865 285 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 H2BFMP0C1H6 154 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 CRABP1P29762 137 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 GFERP55789 205 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 TMEM244Q5VVB8 128 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 HOGA1Q86XE5 327 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 ANGPTL5Q86XS5 388 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 NKAIN3Q8N8D7 197 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 TCTN2Q96GX1 697 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 ACKR4Q9NPB9 350 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 IGHV5-51A0A0C4DH38 117 aa12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 MEX3AA1L020 520 aaKnown RBP12.54□□□□□ -0.4
CLCNKA-202ENST00000375692 A8MVM7 634 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms