RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 IL23AQ9NPF7 189 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 SSUH2Q9Y2M2 353 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 CNMDO75829 334 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 TEX30Q5JUR7 227 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 ESPNLQ6ZVH7 1005 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 TMEM179BQ7Z7N9 219 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 SLC26A10Q8NG04 563 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 SLC35E1Q96K37 410 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 CDRT15L2A8MXV6 281 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 NME2P1O60361 137 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 ELOBQ15370 118 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 VAMP3Q15836 100 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 TMEM182Q6ZP80 229 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-204ENST00000375290 PNPLA1Q8N8W4 532 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 POM121Q96HA1 1249 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 SELENOFO60613 162 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 PRAMEF4O60810 478 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 PGA4P0DJD7 388 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 PGA5P0DJD9 388 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 P2RY2P41231 377 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 LINC00346Q8IVM7 164 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 OR8U1Q8NH10 309 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 BSCL2Q96G97 398 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-204ENST00000375290 TAAR6Q96RI8 345 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 FKBP11Q9NYL4 201 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 OMGP23515 440 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 GPR32P1Q8NGA4 272 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 CD99L2Q8TCZ2 262 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 FAM210BQ96KR6 192 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 PLEKHB1Q9UF11 243 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-204ENST00000375290 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 KIAA1217Q5T5P2 1943 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 STRCQ7RTU9 1775 aa9.25□□□□□ -0.93
PTCH1-204ENST00000375290 FAM171A2A8MVW0 826 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 CTAG2O75638 210 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 OR5M10Q6IEU7 315 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SLC24A4Q8NFF2 622 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 WWTR1Q9GZV5 400 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 A0A0B4J2E0 115 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 A0A1B0GX12 115 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 FRG2CA6NGY1 282 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 DOK2O60496 412 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 MMP9P14780 707 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 OR10J1P30954 320 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 IL24Q13007 206 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SLAMF6Q96DU3 332 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 GDF2Q9UK05 429 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-204ENST00000375290 A6NIN4 97 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 CYB5R2Q6BCY4 276 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SGIP1Q9BQI5 828 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 PAAF1Q9BRP4 392 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 HINT2Q9BX68 163 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 ADGRL4Q9HBW9 690 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 PDE6DO43924 150 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 PIGPP57054 158 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SSX1Q16384 188 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 ZNF343Q6P1L6 599 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 MOB3CQ70IA8 216 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 OR8B4Q96RC9 309 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 NDFIP1Q9BT67 221 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 HEYLQ9NQ87 328 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-204ENST00000375290 FBXO34Q9NWN3 711 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SLC10A3P09131 477 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 EXOSC7Q15024 291 aaKnown RBP9.24□□□□□ -0.93
PTCH1-204ENST00000375290 TMEM241Q24JQ0 296 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SOWAHCQ53LP3 525 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-204ENST00000375290 PABPC1L2AQ5JQF8 200 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SLC39A5Q6ZMH5 540 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 MED20Q9H944 212 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 CCDC88CQ9P219 2028 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 A0A0A6YYC8 382 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-204ENST00000375290 A0A0A6YYD5 115 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 I3L1I5 382 aaPredicted RBP9.24□□□□□ -0.93
PTCH1-204ENST00000375290 CDS2O95674 445 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 BIDP55957 195 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 ACY3Q96HD9 319 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 NAT8Q9UHE5 227 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 HAND1O96004 215 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 OR5AC1P0C628 307 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 PTNP21246 168 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 RPL7L1Q6DKI1 246 aaKnown RBP9.24□□□□□ -0.93
PTCH1-204ENST00000375290 KCNE1BA0A087WTH5 132 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 LNP1A1A4G5 178 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SFT2D2O95562 160 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 TMEM217Q8N7C4 229 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 IKZF5Q9H5V7 419 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 A4GNTQ9UNA3 340 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 CACNA1CQ13936 2221 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 A0A087WUJ7 227 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 RGRP47804 291 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 SSR4P51571 173 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 GGNBP1Q5YKI7 109 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 AMIGO3Q86WK7 504 aa9.24□□□□□ -0.93
PTCH1-204ENST00000375290 A0A1B0GX78 115 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 PYCARD-AS1I3L0S3 204 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 HSBP1O75506 76 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 RRADP55042 308 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 RPS4Y2Q8TD47 263 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TBC1D28Q2M2D7 210 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 PIGCQ92535 297 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms