RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CSNK1EP49674 416 aaKnown RBP9.89□□□□□ -0.83
CCDC40-203ENST00000374877 PJVKQ0ZLH3 352 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 SLC9A3R2Q15599 337 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 KDM8Q8N371 416 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 SEC11CQ9BY50 192 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 OR52A1Q9UKL2 312 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 RAB22AQ9UL26 194 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 CLDN16Q9Y5I7 305 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 IGLV1-36A0A0B4J1U3 117 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 LOC101059948A0A1B0GTJ6 334 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM269A0A1B0GVZ9 245 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 MEX3AA1L020 520 aaKnown RBP9.89□□□□□ -0.83
CCDC40-203ENST00000374877 NUDT21O43809 227 aaKnown RBP9.89□□□□□ -0.83
CCDC40-203ENST00000374877 WISP1O95388 367 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 BGLAPP02818 100 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 DHPSP49366 369 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-203ENST00000374877 HHEXQ03014 270 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 ZNF117Q03924 483 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 PHF19Q5T6S3 580 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 BHLHE23Q8NDY6 225 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 FGGYQ96C11 551 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 RNF126Q9BV68 326 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 NRSN2Q9GZP1 204 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 RHOFQ9HBH0 211 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 TMEM100Q9NV29 134 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 PILRBQ9UKJ0 227 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 R4GMQ9 66 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 TRAV36DV7A0A075B6V5 113 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 LILRA5A6NI73 299 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 H0YIZ8 118 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 ICOSLGO75144 302 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 ADAP1O75689 374 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 MUC1P15941 1255 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-203ENST00000374877 CBR1P16152 277 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 PI3P19957 117 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 NR0B1P51843 470 aaKnown RBP9.89□□□□□ -0.83
CCDC40-203ENST00000374877 S100A12P80511 92 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 SGCAQ16586 387 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 C10orf91Q5T1B1 145 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 RABEPKQ7Z6M1 372 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 PAQR4Q8N4S7 273 aaPredicted RBP9.89□□□□□ -0.83
CCDC40-203ENST00000374877 NANPQ8TBE9 248 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 NRIP2Q9BQI9 281 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 FN3KRPQ9HA64 309 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 CYTL1Q9NRR1 136 aa9.89□□□□□ -0.83
CCDC40-203ENST00000374877 EIF3GO75821 320 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCDC40-203ENST00000374877 ZNF806P0C7X5 589 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 ZNF823P16415 610 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 GLO1Q04760 184 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 PEA15Q15121 130 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 DCXRQ7Z4W1 244 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 C19orf47Q8N9M1 422 aaKnown RBP9.88□□□□□ -0.83
CCDC40-203ENST00000374877 OR52N4Q8NGI2 321 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 B4DGG1 531 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 IL33O95760 270 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 SNRPEP62304 92 aaKnown RBP9.88□□□□□ -0.83
CCDC40-203ENST00000374877 UNC119Q13432 240 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 C1orf100Q5SVJ3 147 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 FAHD2BQ6P2I3 314 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-203ENST00000374877 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.88□□□□□ -0.83
CCDC40-203ENST00000374877 NKAIN3Q8N8D7 197 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 OR4K15Q8NH41 348 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 FAHD2AQ96GK7 314 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 LPAR3Q9UBY5 353 aa9.88□□□□□ -0.83
CCDC40-203ENST00000374877 FAM157CP0CG43 387 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 HOXB1P14653 301 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 PTGFRP43088 359 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 NPY4RP50391 375 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 IGLV3-21P80748 117 aaPredicted RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 CYCSP99999 105 aaKnown RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 NAAAQ02083 359 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 MST1LQ2TV78 715 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 IL34Q6ZMJ4 242 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 COX15Q7KZN9 410 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 FOXRED2Q8IWF2 684 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 OR2I1PQ8NGU4 316 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 NUBPLQ8TB37 319 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 ZNF519Q8TB69 540 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 ADAM19Q9H013 955 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 OR5AC2Q9NZP5 309 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 ZMAT5Q9UDW3 170 aaKnown RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 NUDT19A8MXV4 375 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 YKT6O15498 198 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 SGCEO43556 437 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 IFNA4P05014 189 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 RAB6AP20340 208 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 AKR1C3P42330 323 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 CX3CR1P49238 355 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 ELAVL1Q15717 326 aaKnown RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 SGCBQ16585 318 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 SLC29A4Q7RTT9 530 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 SLC16A13Q7RTY0 426 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 ZNF101Q8IZC7 436 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 SPACA5Q96QH8 159 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 NMES1Q9C002 83 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 OR11A1Q9GZK7 315 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 TXNIPQ9H3M7 391 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 PTGES2Q9H7Z7 377 aa9.87□□□□□ -0.83
CCDC40-203ENST00000374877 RCC2Q9P258 522 aaKnown RBP9.87□□□□□ -0.83
CCDC40-203ENST00000374877 TDRD6O60522 2096 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms