RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 IFITM5A6NNB3 132 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 C11orf98E9PRG8 122 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 RP2O75695 350 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 TRAPPC6AO75865 159 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 AKR7A3O95154 331 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 OR6A2O95222 327 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 AHSA1O95433 338 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 IGHMP01871 453 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 IFNA4P05014 189 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 PPP3CBP16298 524 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 GDF1P27539 372 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 HLXQ14774 488 aaPredicted RBP12.66□□□□□ -0.38
HMGA1-203ENST00000374116 PDZD9Q8IXQ8 264 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 TMEM251Q8N6I4 163 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 ZFP62Q8NB50 900 aaPredicted RBP12.66□□□□□ -0.38
HMGA1-203ENST00000374116 ZNF519Q8TB69 540 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 ST8SIA1Q92185 356 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 NSMAFQ92636 917 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 ORAI1Q96D31 301 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 FRRS1LQ9P0K9 344 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 IKZF2Q9UKS7 526 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 FBXL3Q9UKT7 428 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 LIPGQ9Y5X9 500 aa12.66□□□□□ -0.38
HMGA1-203ENST00000374116 DNAJC13O75165 2243 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 A0A0B4J203 849 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 TRBV5-5A0A0J9YX44 114 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 PRSS37A4D1T9 235 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 SHISA8B8ZZ34 492 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 FTCDNL1E5RQL4 147 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 PYCARD-AS1I3L0S3 204 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 PLPP3O14495 311 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 GABRA1P14867 456 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 NFYAP23511 347 aaPredicted RBP12.65□□□□□ -0.38
HMGA1-203ENST00000374116 ACKR1Q16570 336 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 HFEQ30201 348 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 IGSF11Q5DX21 431 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 RPUSD3Q6P087 351 aaKnown RBP12.65□□□□□ -0.38
HMGA1-203ENST00000374116 ATRAIDQ6UW56 229 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 FAM180AQ6UWF9 173 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 DPY19L4Q7Z388 723 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 OR5M9Q8NGP3 310 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 OR5M1Q8NGP8 315 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 OTOSQ8NHW6 89 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 LGALS14Q8TCE9 139 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 CPT1CQ8TCG5 803 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 ASB17Q8WXJ9 295 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 NTNG2Q96CW9 530 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 GFI1Q99684 422 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 C20orf85Q9H1P6 137 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 PLEKHA1Q9HB21 404 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
HMGA1-203ENST00000374116 CYB5R1Q9UHQ9 305 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 CLEC4AQ9UMR7 237 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 B9D1Q9UPM9 204 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 RPH3AQ9Y2J0 694 aaPredicted RBP12.65□□□□□ -0.38
HMGA1-203ENST00000374116 V9GY05 133 aa12.65□□□□□ -0.38
HMGA1-203ENST00000374116 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 NAP1L6A6NFF2 107 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 TMEM212A6NML5 194 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 H7C2Y5 167 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 LINC01387J3KSC0 135 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 NUPL2O15504 423 aaKnown RBP12.65□□□□□ -0.39
HMGA1-203ENST00000374116 HPXP02790 462 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 S100A11P31949 105 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 RAB13P51153 203 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 MECP2P51608 486 aaKnown RBP12.65□□□□□ -0.39
HMGA1-203ENST00000374116 RASGEF1BQ0VAM2 473 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF600Q6ZNG1 722 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 C17orf107Q6ZR85 190 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 YRDCQ86U90 279 aaKnown RBP12.65□□□□□ -0.39
HMGA1-203ENST00000374116 OR4D10Q8NGI6 311 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 THEM6Q8WUY1 208 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 TMEM41AQ96HV5 264 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 COMMD4Q9H0A8 199 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF703Q9H7S9 590 aaPredicted RBP12.65□□□□□ -0.39
HMGA1-203ENST00000374116 TCF7L1Q9HCS4 588 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 BIN3Q9NQY0 253 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 GPR160Q9UJ42 338 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 BOKQ9UMX3 212 aaPredicted RBP12.65□□□□□ -0.39
HMGA1-203ENST00000374116 VDAC3Q9Y277 283 aa12.65□□□□□ -0.39
HMGA1-203ENST00000374116 SHANK1Q9Y566 2161 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 OR4C45A6NMZ5 311 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 LGALS8O00214 317 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 RGS11O94810 467 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 GLSO94925 669 aaPredicted RBP12.64□□□□□ -0.39
HMGA1-203ENST00000374116 ALDOBP05062 364 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 S100A6P06703 90 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 FCER2P06734 321 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 CALCBP10092 127 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 SRP9P49458 86 aaKnown RBP12.64□□□□□ -0.39
HMGA1-203ENST00000374116 GK2Q14410 553 aaPredicted RBP12.64□□□□□ -0.39
HMGA1-203ENST00000374116 IGFBP7Q16270 282 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 MICBQ29980 383 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 SLC25A53Q5H9E4 307 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 WIPI1Q5MNZ9 446 aaPredicted RBP12.64□□□□□ -0.39
HMGA1-203ENST00000374116 FDX2Q6P4F2 183 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF433Q8N7K0 673 aaPredicted RBP12.64□□□□□ -0.39
HMGA1-203ENST00000374116 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 OR2M3Q8NG83 312 aa12.64□□□□□ -0.39
HMGA1-203ENST00000374116 OR4K17Q8NGC6 315 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms