RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 LIN7BQ9HAP6 207 aa18.06■□□□□ 0.48
SYNC-201ENST00000373484 MEPEQ9NQ76 525 aaPredicted RBP18.06■□□□□ 0.48
SYNC-201ENST00000373484 UTP20O75691 2785 aaKnown RBP18.06■□□□□ 0.48
SYNC-201ENST00000373484 IGKV1D-42A0A075B6H8 117 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 IGHV3-15A0A0B4J1V0 119 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 ANKRD20A5PA0PJZ0 165 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 IFITM5A6NNB3 132 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 SMAD9O15198 467 aaKnown RBP18.05■□□□□ 0.48
SYNC-201ENST00000373484 ZNF250P15622 560 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 GUSBP1Q15486 140 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 C5orf46Q6UWT4 87 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 PSMG3-AS1Q96PY0 264 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 PRELID1Q9Y255 219 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 hCG_1807616A0A1W2PRN6 198 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 LIPT2A6NK58 231 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 HMSDA8MTL9 139 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 B3GALNT1O75752 331 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 TNFSF13O75888 250 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 RGS11O94810 467 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 PPP1R3DO95685 299 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 TFP02787 698 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 SRMP19623 302 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 KLK2P20151 261 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 BMP5P22003 454 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 OPRM1P35372 400 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 TSPAN5P62079 268 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 SLC35A1P78382 337 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 SLC35F2Q8IXU6 374 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 RELL2Q8NC24 303 aaPredicted RBP18.05■□□□□ 0.48
SYNC-201ENST00000373484 MS4A3Q96HJ5 214 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 GMPPAQ96IJ6 420 aaPredicted RBP18.05■□□□□ 0.48
SYNC-201ENST00000373484 MCCC2Q9HCC0 563 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 GLRX2Q9NS18 164 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 ZNF224Q9NZL3 707 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 SESN1Q9Y6P5 492 aa18.05■□□□□ 0.48
SYNC-201ENST00000373484 TRBV2A0A0J9YWF9 115 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 A0A1W2PNV4 684 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 NDUFB2O95178 105 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 CLDN1O95832 211 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 FUT1P19526 365 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 SELENOPP49908 381 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 H3F3AP84243 136 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 RNPS1Q15287 305 aaKnown RBP18.04■□□□□ 0.48
SYNC-201ENST00000373484 LINGO2Q7L985 606 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 SSX6Q7RTT6 188 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 KCTD20Q7Z5Y7 419 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 ABHD3Q8WU67 409 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 KTI12Q96EK9 354 aaPredicted RBP18.04■□□□□ 0.48
SYNC-201ENST00000373484 S100A16Q96FQ6 103 aaKnown RBP18.04■□□□□ 0.48
SYNC-201ENST00000373484 PTDSS2Q9BVG9 487 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 PIPOXQ9P0Z9 390 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 RCE1Q9Y256 329 aa18.04■□□□□ 0.48
SYNC-201ENST00000373484 FAM90A27PA6NNH2 459 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 KRBOX1C9JBD0 128 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 CREBL2O60519 120 aaPredicted RBP18.03■□□□□ 0.48
SYNC-201ENST00000373484 EIF1BO60739 113 aaKnown RBP18.03■□□□□ 0.48
SYNC-201ENST00000373484 CYTIPO60759 359 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 SS18L1O75177 396 aaPredicted RBP18.03■□□□□ 0.48
SYNC-201ENST00000373484 AHSA1O95433 338 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 CTRB1P17538 263 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 KIR2DL2P43627 348 aaPredicted RBP18.03■□□□□ 0.48
SYNC-201ENST00000373484 FHL1Q13642 323 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 OR7A5Q15622 319 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 EEF1A1P5Q5VTE0 462 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 ZNF626Q68DY1 528 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 CTRB2Q6GPI1 263 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 BEST4Q8NFU0 473 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 SNX33Q8WV41 574 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 RDH8Q9NYR8 311 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 ZNF281Q9Y2X9 895 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 PTPN13Q12923 2485 aa18.03■□□□□ 0.48
SYNC-201ENST00000373484 FTCDNL1E5RQL4 147 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 ARPC3O15145 178 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 CFDP00746 253 aaPredicted RBP18.02■□□□□ 0.48
SYNC-201ENST00000373484 PLGP00747 810 aaPredicted RBP18.02■□□□□ 0.48
SYNC-201ENST00000373484 SSTR2P30874 369 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 TP53I3Q53FA7 332 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 ABLIM2Q6H8Q1 611 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 FAM214BQ7L5A3 538 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 MCEMP1Q8IX19 187 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 OR13C5Q8NGS8 318 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 MFSD8Q8NHS3 518 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 SLC25A38Q96DW6 304 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 AUNIPQ9H7T9 357 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 GP6Q9HCN6 339 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 ING1Q9UK53 422 aaPredicted RBP18.02■□□□□ 0.48
SYNC-201ENST00000373484 CLEC4AQ9UMR7 237 aa18.02■□□□□ 0.48
SYNC-201ENST00000373484 AK6Q9Y3D8 172 aaKnown RBP18.02■□□□□ 0.48
SYNC-201ENST00000373484 KLF2Q9Y5W3 355 aaPredicted RBP18.02■□□□□ 0.48
SYNC-201ENST00000373484 TRAV36DV7A0A075B6V5 113 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 TRAV27A0A087WT01 109 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 CIB4A0PJX0 185 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 A1L4Q6 167 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 MFSD2BA6NFX1 497 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 ZNF814B7Z6K7 855 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 GMDSO60547 372 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 NDUFB6O95139 128 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 CLUP10909 449 aa18.02■□□□□ 0.47
SYNC-201ENST00000373484 NFYAP23511 347 aaPredicted RBP18.02■□□□□ 0.47
SYNC-201ENST00000373484 EDNRAP25101 427 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms