RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 CCDC168Q8NDH2 2452 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 TEX15Q9BXT5 2789 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 SMPD2O60906 423 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 MRPL3P09001 348 aaKnown RBP13.71□□□□□ -0.21
PFDN4-201ENST00000371419 RSPO1Q2MKA7 263 aaPredicted RBP13.71□□□□□ -0.21
PFDN4-201ENST00000371419 KRTAP27-1Q3LI81 207 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 C1orf174Q8IYL3 243 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 KLHL36Q8N4N3 616 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 OR52N1Q8NH53 320 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 ABHD4Q8TB40 342 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 THEM6Q8WUY1 208 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 IGFBPL1Q8WX77 278 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 SPTSSAQ969W0 71 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 TRAF4Q9BUZ4 470 aaPredicted RBP13.71□□□□□ -0.21
PFDN4-201ENST00000371419 CENPMQ9NSP4 180 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 CBLN4Q9NTU7 201 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 TBCCD1Q9NVR7 557 aa13.71□□□□□ -0.21
PFDN4-201ENST00000371419 B9A039 149 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 ZNF878C9JN71 531 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 F5H5K5 113 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 CD8AP01732 235 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 LIMS3P0CW19 117 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 LIMS4P0CW20 117 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 CPEP16870 476 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 ACSM1Q08AH1 577 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 TAF13Q15543 124 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 EFNB3Q15768 340 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 SSX1Q16384 188 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 ZNF829Q3KNS6 432 aaPredicted RBP13.7□□□□□ -0.22
PFDN4-201ENST00000371419 RGS7BPQ6MZT1 257 aaPredicted RBP13.7□□□□□ -0.22
PFDN4-201ENST00000371419 TMPRSS11AQ6ZMR5 421 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 RFPL4BQ6ZWI9 263 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 RHOUQ7L0Q8 258 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 OR1J1Q8NGS3 322 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 RNF133Q8WVZ7 376 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 S100ZQ8WXG8 99 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 MRPL24Q96A35 216 aaKnown RBP13.7□□□□□ -0.22
PFDN4-201ENST00000371419 MBD6Q96DN6 1003 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 CHCHD6Q9BRQ6 235 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 OR51E2Q9H255 320 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 ADGRL4Q9HBW9 690 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 NDUFB11Q9NX14 153 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 LAMP5Q9UJQ1 280 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 STUB1Q9UNE7 303 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 TMEM14AQ9Y6G1 99 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 A3GALT2U3KPV4 340 aa13.7□□□□□ -0.22
PFDN4-201ENST00000371419 LOC100506127A0A0U1RQW1 187 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 J3QRE1 110 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 NGFP01138 241 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 SBK2P0C263 348 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 ACSM4P0C7M7 580 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 BMP4P12644 408 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 ALOX5APP20292 161 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 TPTEP56180 551 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 ERVS71-1P61550 626 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 PPP1CBP62140 327 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 ACTC1P68032 377 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 ACTA1P68133 377 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 TPBGQ13641 420 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 MSMPQ1L6U9 139 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 SWI5Q1ZZU3 235 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 MST1LQ2TV78 715 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 C11orf71Q6IPW1 123 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 SPATC1Q76KD6 591 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 ACBD7Q8N6N7 88 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 OR51G2Q8NGK0 314 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 AMELYQ99218 206 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 MNTQ99583 582 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 PLK3Q9H4B4 646 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 BEX4Q9NWD9 120 aaPredicted RBP13.69□□□□□ -0.22
PFDN4-201ENST00000371419 ERVK13-1Q9NX77 482 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 KLHDC2Q9Y2U9 406 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 CAB39Q9Y376 341 aaPredicted RBP13.69□□□□□ -0.22
PFDN4-201ENST00000371419 MAST4O15021 2626 aa13.69□□□□□ -0.22
PFDN4-201ENST00000371419 J3QW42 95 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 M0R135 149 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 INHBBP09529 407 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 TUBG1P23258 451 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
PFDN4-201ENST00000371419 EVX1P49640 407 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 HCCSP53701 268 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 GRB2P62993 217 aaKnown RBP13.68□□□□□ -0.22
PFDN4-201ENST00000371419 DEFB113Q30KQ7 82 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 PHC2Q8IXK0 858 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 SLC35F2Q8IXU6 374 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 UFD1Q92890 307 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 BORCS5Q969J3 196 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 APOBEC3DQ96AK3 386 aaPredicted RBP13.68□□□□□ -0.22
PFDN4-201ENST00000371419 ZNF799Q96GE5 643 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 KCNJ15Q99712 375 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 MRPL37Q9BZE1 423 aaKnown RBP13.68□□□□□ -0.22
PFDN4-201ENST00000371419 MMP27Q9H306 513 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 TUBG2Q9NRH3 451 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 CCDC59Q9P031 241 aaKnown RBP13.68□□□□□ -0.22
PFDN4-201ENST00000371419 SSR3Q9UNL2 185 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 USF3Q68DE3 2245 aa13.68□□□□□ -0.22
PFDN4-201ENST00000371419 OVOL3O00110 214 aa13.67□□□□□ -0.22
PFDN4-201ENST00000371419 APOL3O95236 402 aa13.67□□□□□ -0.22
PFDN4-201ENST00000371419 H2BFMP0C1H6 154 aa13.67□□□□□ -0.22
PFDN4-201ENST00000371419 ZNF250P15622 560 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms