RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 SPATA46Q5T0L3 261 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 RIMKLAQ8IXN7 391 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 SYS1Q8N2H4 156 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 SPNS1Q9H2V7 528 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 BCL2L10Q9HD36 194 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 SPRY1O43609 319 aaPredicted RBP20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 TGM1P22735 817 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 SLC25A26Q70HW3 274 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 EXD3Q8N9H8 876 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 OR10G3Q8NGC4 313 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 FAM103A1Q9BTL3 118 aaKnown RBP20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 SLC22A20A6NK97 555 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 PDZK1IP1Q13113 114 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 NLRC3Q7RTR2 1065 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 FAM173AQ9BQD7 235 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 KIRREL2Q6UWL6 708 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 IP6K3Q96PC2 410 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 MAGT1Q9H0U3 335 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 BARX1Q9HBU1 254 aaPredicted RBP20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 PPP5D1E7EU14 171 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 GABRB1P18505 474 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 ACOT7LQ6ZUV0 252 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 OR2A1Q8NGT9 310 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 S1PR3Q99500 378 aa20.04■□□□□ 0.8
TM9SF3-201ENST00000371142 CHEK1O14757 476 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 PSMB6P28072 239 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 RPL12P30050 165 aaKnown RBP20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 SULT1C4O75897 302 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 CD80P33681 288 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 ZNF90Q03938 601 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 FAM122CQ6P4D5 195 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 AKR7LQ8NHP1 331 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 CNRIP1Q96F85 164 aaPredicted RBP20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 OR4E1P0C645 316 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 ELFN2Q5R3F8 820 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 ST3GAL6Q9Y274 331 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 A0A1B0GTL3 188 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 ATP6V1G2-DDX39BF2Z307 99 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 ZNF354AO60765 605 aaPredicted RBP20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 BTNL8Q6UX41 500 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 SHISA8B8ZZ34 492 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 FZD2Q14332 565 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 ADGRG3Q86Y34 549 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 RPUSD4Q96CM3 377 aaKnown RBP20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 DLL4Q9NR61 685 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 CLCF1Q9UBD9 225 aa20.03■□□□□ 0.8
TM9SF3-201ENST00000371142 OR7C2O60412 319 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 MVB12AQ96EY5 273 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 SARGQ9BW04 601 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 TEX101Q9BY14 249 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 PSENENQ9NZ42 101 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 PIGPP57054 158 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 VASH2Q86V25 355 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 SLC35D1Q9NTN3 355 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 SLC25A6P12236 298 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 ERHP84090 104 aaKnown RBP20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 PRSS36Q5K4E3 855 aa20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 ACTR3CQ9C0K3 210 aaPredicted RBP20.02■□□□□ 0.8
TM9SF3-201ENST00000371142 TRBV5-4A0A0C4DH59 114 aa20.02■□□□□ 0.79
TM9SF3-201ENST00000371142 OR5H8P0DN80 308 aa20.02■□□□□ 0.79
TM9SF3-201ENST00000371142 GNPNAT1Q96EK6 184 aaPredicted RBP20.02■□□□□ 0.79
TM9SF3-201ENST00000371142 COMMD5Q9GZQ3 224 aa20.02■□□□□ 0.79
TM9SF3-201ENST00000371142 H7BYZ3 331 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 PCBP3P57721 371 aaKnown RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 ZNF628Q5EBL2 1059 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 RPL7L1Q6DKI1 246 aaKnown RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 HES7Q9BYE0 225 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 FBXO8Q9NRD0 319 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 FIGNL2A6NMB9 653 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 ADAM10O14672 748 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 TAS2R45P59539 299 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 TSEN54Q7Z6J9 526 aaKnown RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 ZNF816Q0VGE8 651 aaPredicted RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 ANKRD53Q8N9V6 530 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 RELL2Q8NC24 303 aaPredicted RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 ZNF629Q9UEG4 869 aaPredicted RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 STRAPQ9Y3F4 350 aaKnown RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 ACOT6Q3I5F7 207 aaPredicted RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 FAM219BQ5XKK7 198 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 OR52B4Q8NGK2 314 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 TECTBQ96PL2 329 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 RHNO1Q9BSD3 238 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 NDRG3Q9UGV2 375 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 A0A0A6YYD5 115 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 NTF3P20783 257 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 ARRB2P32121 409 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 DCTDP32321 178 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 TRMT61AQ96FX7 289 aaKnown RBP20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 POMT2Q9UKY4 750 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 ANKRD36CQ5JPF3 1778 aa20.01■□□□□ 0.79
TM9SF3-201ENST00000371142 DYNC2LI1Q8TCX1 351 aa20■□□□□ 0.79
TM9SF3-201ENST00000371142 GPX8Q8TED1 209 aa20■□□□□ 0.79
TM9SF3-201ENST00000371142 CORO2AQ92828 525 aa20■□□□□ 0.79
TM9SF3-201ENST00000371142 FAM122AQ96E09 287 aa20■□□□□ 0.79
TM9SF3-201ENST00000371142 ALKBH3Q96Q83 286 aaPredicted RBP20■□□□□ 0.79
TM9SF3-201ENST00000371142 GSX2Q9BZM3 304 aa20■□□□□ 0.79
TM9SF3-201ENST00000371142 GPM6AP51674 278 aa20■□□□□ 0.79
TM9SF3-201ENST00000371142 SLC25A35Q3KQZ1 300 aa20■□□□□ 0.79
TM9SF3-201ENST00000371142 PXDC1Q5TGL8 231 aa20■□□□□ 0.79
TM9SF3-201ENST00000371142 TMEM9BQ9NQ34 198 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms