RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 LAT2Q9GZY6 243 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 NDRG4Q9ULP0 352 aaKnown RBP11.34□□□□□ -0.59
TMEM56-201ENST00000370203 TRGV5A0A0B4J1U4 118 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 SH2D7A6NKC9 451 aaPredicted RBP11.34□□□□□ -0.59
TMEM56-201ENST00000370203 XRCC2O43543 280 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 ATP1B1P05026 303 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 PTHLHP12272 177 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 COL9A1P20849 921 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 CNR1P21554 472 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 RAP2BP61225 183 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 FAM27D1Q5T7N8 215 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 C11orf42Q8N5U0 333 aa11.34□□□□□ -0.59
TMEM56-201ENST00000370203 HMX2A2RU54 273 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 MRPS14O60783 128 aaKnown RBP11.33□□□□□ -0.6
TMEM56-201ENST00000370203 B3GNTL1Q67FW5 361 aaPredicted RBP11.33□□□□□ -0.6
TMEM56-201ENST00000370203 LGI3Q8N145 548 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 NANOGP1Q8N7R0 232 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 MORN4Q8NDC4 146 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 RFESDQ8TAC1 157 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 NANPQ8TBE9 248 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 DBPQ10586 325 aaPredicted RBP11.33□□□□□ -0.6
TMEM56-201ENST00000370203 SELENBP1Q13228 472 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 FBXL14Q8N1E6 418 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 ST3GAL6Q9Y274 331 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 COL16A1Q07092 1604 aaPredicted RBP11.33□□□□□ -0.6
TMEM56-201ENST00000370203 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
TMEM56-201ENST00000370203 AGFG2O95081 481 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 CA6P23280 308 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 S100A7P31151 101 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 SUB1P53999 127 aaKnown RBP eCLIP11.33□□□□□ -0.6
TMEM56-201ENST00000370203 OR2T2Q6IF00 324 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 SSX7Q7RTT5 188 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 BTLAQ7Z6A9 289 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 DHRS9Q9BPW9 319 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 FBXO8Q9NRD0 319 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 POMT1Q9Y6A1 747 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 PMS2P1A4D2B8 440 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 ZNF785A8K8V0 405 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 RAB5CP51148 216 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 FOXL2P58012 376 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 GAMTQ14353 236 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 Q56UQ5 140 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 SLC35D3Q5M8T2 416 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 KIRREL2Q6UWL6 708 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 OR1L3Q8NH93 324 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 FAM122AQ96E09 287 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 TCRBV5S1A1TA0A578 114 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 NUDT19A8MXV4 375 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 DCTN6O00399 190 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 UBL3O95164 117 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 MARCH1Q8TCQ1 289 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 ARL2-SNX15V9GYD0 113 aa11.33□□□□□ -0.6
TMEM56-201ENST00000370203 GOSR1O95249 250 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 TMEM267Q0VDI3 215 aaPredicted RBP11.32□□□□□ -0.6
TMEM56-201ENST00000370203 HIST2H3AQ71DI3 136 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 SVBPQ8N300 66 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 NKAIN3Q8N8D7 197 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 FER1L6Q2WGJ9 1857 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 ACOT8O14734 319 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 SOHLH1Q5JUK2 328 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 FAM58AQ8N1B3 248 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 OR4S1Q8NGB4 309 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 BTAF1O14981 1849 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 HES3Q5TGS1 186 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 OR6S1Q8NH40 331 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 OR2V1Q8NHB1 315 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 SLC25A43Q8WUT9 341 aaPredicted RBP11.32□□□□□ -0.6
TMEM56-201ENST00000370203 OR8B4Q96RC9 309 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 DDOQ99489 341 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 METTL12A8MUP2 240 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 SYT5O00445 386 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 CHEK1O14757 476 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 SPINK4O60575 86 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 LRP3O75074 770 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 PPICP45877 212 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 INSL4Q14641 139 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 C1orf210Q8IVY1 113 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 UBALD2Q8IYN6 164 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 SPEM1Q8N4L4 309 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 SLC38A9Q8NBW4 561 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 LYSMD1Q96S90 227 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 ADAT1Q9BUB4 502 aaKnown RBP11.32□□□□□ -0.6
TMEM56-201ENST00000370203 COMMD5Q9GZQ3 224 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 TIMM9Q9Y5J7 89 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 OR2A25A4D2G3 310 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 MT-CO3P00414 261 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 ACHEP22303 614 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 HOXD12P35452 270 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 RAB1AP62820 205 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 CMTM4Q8IZR5 234 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 ARIH2OSQ8N7S6 290 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 OR6K3Q8NGY3 331 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 S1PR3Q99500 378 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 GAL3ST2Q9H3Q3 398 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 DUSP22Q9NRW4 184 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 B3GALT5Q9Y2C3 310 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 TSTD3H0UI37 97 aa11.32□□□□□ -0.6
TMEM56-201ENST00000370203 PHYHD1Q5SRE7 291 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms