RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SEZ6L2Q6UXD5 910 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF813Q6ZN06 617 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 ABI3BPQ7Z7G0 1075 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 ARRDC1Q8N5I2 433 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 OR4N2Q8NGD1 307 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 MITD1Q8WV92 249 aa14.39□□□□□ -0.11
COL17A1-202ENST00000369733 FAM221AA4D161 298 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 SCGB2A1O75556 95 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 CALCRP30988 508 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 IFITM2Q01629 132 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 COMMD1Q8N668 190 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 LHFPL5Q8TAF8 219 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 GPR137Q96N19 417 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 FGF21Q9NSA1 209 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 SIRT3Q9NTG7 399 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 LRP12Q9Y561 859 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 LAMB2P55268 1798 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 PHOX2AO14813 284 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 CST4P01036 141 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 SLC25A1P53007 311 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 CARD18P57730 90 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 DCDP81605 110 aaKnown RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 PNLIPRP3Q17RR3 467 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 DMKNQ6E0U4 476 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 OR4D10Q8NGI6 311 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 RTN4IP1Q8WWV3 396 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 HIPK2Q9H2X6 1198 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 MYOTQ9UBF9 498 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 FOCADQ5VW36 1801 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF749O43361 778 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 WNT11O96014 354 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 HPXP02790 462 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 SSR4P51571 173 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 DVL1P1P54792 670 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 TGFBR3Q03167 851 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 FABP9Q0Z7S8 132 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 THSD4Q6ZMP0 1018 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 THNSL2Q86YJ6 484 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 OR4D11Q8NGI4 311 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 OR51F2Q8NH61 342 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 OR51B4Q9Y5P0 310 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 SCN1AP35498 2009 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 C9orf170A2RU37 121 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 MBTPS2O43462 519 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 WISP3O95389 354 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 MPC2O95563 127 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 B3GNTL1Q67FW5 361 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF610Q8N9Z0 462 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 CCL4L1Q8NHW4 92 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 RPUSD4Q96CM3 377 aaKnown RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 SCMH1Q96GD3 660 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 C1QTNF6Q9BXI9 259 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 MS4A7Q9GZW8 240 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 TMPRSS5Q9H3S3 457 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 NTMQ9P121 344 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 RCL1Q9Y2P8 373 aaKnown RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 F10P00742 488 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 EDN3P14138 238 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 ST6GAL1P15907 406 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 ARHGEF39Q8N4T4 335 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 MORN4Q8NDC4 146 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 OR4F5Q8NH21 305 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 SLC25A43Q8WUT9 341 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 OR4F4Q96R69 305 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 SPOCK3Q9BQ16 436 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 PIGQQ9BRB3 760 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 ELF5Q9UKW6 265 aaPredicted RBP14.38□□□□□ -0.11
COL17A1-202ENST00000369733 HS3ST3A1Q9Y663 406 aa14.38□□□□□ -0.11
COL17A1-202ENST00000369733 GPR31O00270 319 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 CD96P40200 585 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 MZT1Q08AG7 82 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 MAML2Q8IZL2 1156 aaPredicted RBP14.37□□□□□ -0.11
COL17A1-202ENST00000369733 FAM174AQ8TBP5 190 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 MAGT1Q9H0U3 335 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 OR51I2Q9H344 312 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF816-ZNF321PA0A0X1KG74 233 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 METTL15P1P0C7V9 234 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 FPR2P25090 351 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 GABRA2P47869 451 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 TOMM34Q15785 309 aaPredicted RBP14.37□□□□□ -0.11
COL17A1-202ENST00000369733 CDONQ4KMG0 1287 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 SLC16A13Q7RTY0 426 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF321PQ8N8H1 164 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 OR13D1Q8NGV5 346 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 ZNF75AQ96N20 296 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 SLCO1B1Q9Y6L6 691 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 SCAND1P57086 179 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 PLA1AQ53H76 456 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 GNG12Q9UBI6 72 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 LANCL1O43813 399 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 IGHA1P01876 353 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 CTXN2P0C2S0 81 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 SLC25A30Q5SVS4 291 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 GCNT2Q8N0V5 402 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 FAM58AQ8N1B3 248 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 OR4D9Q8NGE8 314 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 TMEM18Q96B42 140 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 KTI12Q96EK9 354 aaPredicted RBP14.37□□□□□ -0.11
COL17A1-202ENST00000369733 OR6C1Q96RD1 312 aa14.37□□□□□ -0.11
COL17A1-202ENST00000369733 PRRX2Q99811 253 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms