RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 EXOSC4Q9NPD3 245 aaKnown RBP9.47□□□□□ -0.89
BRCC3-204ENST00000369462 LOC100506127A0A0U1RQW1 187 aa9.47□□□□□ -0.89
BRCC3-204ENST00000369462 ACOD1A6NK06 481 aa9.47□□□□□ -0.89
BRCC3-204ENST00000369462 MAGEB1P43366 347 aa9.47□□□□□ -0.89
BRCC3-204ENST00000369462 LSM3P62310 102 aaKnown RBP9.47□□□□□ -0.89
BRCC3-204ENST00000369462 SORDQ00796 357 aa9.47□□□□□ -0.89
BRCC3-204ENST00000369462 ZNF704Q6ZNC4 412 aaPredicted RBP9.47□□□□□ -0.89
BRCC3-204ENST00000369462 COLCA1Q6ZS62 124 aa9.47□□□□□ -0.89
BRCC3-204ENST00000369462 OR2AE1Q8NHA4 323 aa9.47□□□□□ -0.89
BRCC3-204ENST00000369462 RGP1Q92546 391 aaPredicted RBP9.47□□□□□ -0.89
BRCC3-204ENST00000369462 OR10A2Q9H208 303 aa9.47□□□□□ -0.89
BRCC3-204ENST00000369462 LOC107986453A0A1B0GWG9 222 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 TUBAL3A6NHL2 446 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 ICMTO60725 284 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 HLA-DPB1P04440 258 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 CD1AP06126 327 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 FAM157BP0CG42 384 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 UBCP0CG48 685 aaKnown RBP9.46□□□□□ -0.89
BRCC3-204ENST00000369462 CD53P19397 219 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 CRYBB2P43320 205 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 RPS11P62280 158 aaKnown RBP eCLIP9.46□□□□□ -0.89
BRCC3-204ENST00000369462 FABP5Q01469 135 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 NAAAQ02083 359 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 SSX8Q7RTT4 187 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 ABHD4Q8TB40 342 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 APOBEC3DQ96AK3 386 aaPredicted RBP9.46□□□□□ -0.89
BRCC3-204ENST00000369462 SOX7Q9BT81 388 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 SP140LQ9H930 580 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 GPR84Q9NQS5 396 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 BATF3Q9NR55 127 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 EIF3KQ9UBQ5 218 aaKnown RBP9.46□□□□□ -0.89
BRCC3-204ENST00000369462 STARD10Q9Y365 291 aa9.46□□□□□ -0.89
BRCC3-204ENST00000369462 IGHV2OR16-5A0A0B4J2B6 119 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 AIREO43918 545 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 GPX5O75715 221 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 CRYAAP02489 173 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 ZNF35P13682 527 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 YIF1BQ5BJH7 314 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 TMEM244Q5VVB8 128 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 SLC16A12Q6ZSM3 486 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 RFPL4BQ6ZWI9 263 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 ANKRD13BQ86YJ7 626 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 SGK3Q96BR1 496 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 TRMT61AQ96FX7 289 aaKnown RBP9.46□□□□□ -0.9
BRCC3-204ENST00000369462 TBCCD1Q9NVR7 557 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 STUB1Q9UNE7 303 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 CEPT1Q9Y6K0 416 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 A0A0U1RQV5 110 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 A6NHS1 94 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 SYT7O43581 403 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 ISG15P05161 165 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 OCM2P0CE71 109 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 RNF224P0DH78 156 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 CD40P25942 277 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 CALCRP30988 508 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 SOX2P48431 317 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 UCP2P55851 309 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 PRSS12P56730 875 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 TIMM50Q3ZCQ8 353 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 ACSM3Q53FZ2 586 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 TMEM108Q6UXF1 575 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 TMEM91Q6ZNR0 172 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 GPR148Q8TDV2 347 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 FAM71F1Q96KD3 344 aaPredicted RBP9.46□□□□□ -0.9
BRCC3-204ENST00000369462 OR14A2Q96R54 314 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 KCNS3Q9BQ31 491 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 NGBQ9NPG2 151 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 ENPP5Q9UJA9 477 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 HHLA2Q9UM44 414 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 SSR3Q9UNL2 185 aa9.46□□□□□ -0.9
BRCC3-204ENST00000369462 PLCE1Q9P212 2302 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 ABCA4P78363 2273 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 A0A1B0GTI1 187 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 A0A1B0GVI7 797 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 SMIM31A0A1B0GVY4 71 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 A0A1W2PPK0 400 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 GABRPO00591 440 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 ATE1O95260 518 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 ZNF92Q03936 586 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 TRAM1Q15629 374 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 C3orf36Q3SXR2 165 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 GLYATL3Q5SZD4 288 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 CD200R1LQ6Q8B3 271 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 CEACAM19Q7Z692 300 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 TSEN15Q8WW01 171 aaKnown RBP9.45□□□□□ -0.9
BRCC3-204ENST00000369462 REEP6Q96HR9 211 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 LYZL4Q96KX0 146 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 CENPOQ9BU64 300 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 RBM38Q9H0Z9 239 aaKnown RBP9.45□□□□□ -0.9
BRCC3-204ENST00000369462 RNF167Q9H6Y7 350 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 DPRXA6NFQ7 191 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 SMPD2O60906 423 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 RGS9O75916 674 aaPredicted RBP9.45□□□□□ -0.9
BRCC3-204ENST00000369462 ACHEP22303 614 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 PTAFRP25105 342 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 SPATA46Q5T0L3 261 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 FAM27D1Q5T7N8 215 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 C22orf42Q6IC83 251 aa9.45□□□□□ -0.9
BRCC3-204ENST00000369462 RADILQ96JH8 1075 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms