RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 RNF128Q8TEB7 428 aa12.52□□□□□ -0.41
SEMA6C-204ENST00000368914 NANOS1Q8WY41 292 aaKnown RBP12.52□□□□□ -0.41
SEMA6C-204ENST00000368914 CREB3L1Q96BA8 519 aa12.52□□□□□ -0.41
SEMA6C-204ENST00000368914 MICU1Q9BPX6 476 aa12.52□□□□□ -0.41
SEMA6C-204ENST00000368914 BARHL1Q9BZE3 327 aa12.52□□□□□ -0.41
SEMA6C-204ENST00000368914 NIPAL2Q9H841 368 aa12.52□□□□□ -0.41
SEMA6C-204ENST00000368914 DIABLOQ9NR28 239 aa12.52□□□□□ -0.41
SEMA6C-204ENST00000368914 LOC102725191A0A1B0GVB3 256 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 PLPP2O43688 288 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF708P17019 499 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 OR2T2Q6IF00 324 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 C9orf106Q8NAJ2 232 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 WDYHV1Q96HA8 205 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 MED18Q9BUE0 208 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 SLIRPQ9GZT3 109 aaKnown RBP12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 TRAV6A0A075B6T7 132 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 IGLV3-32A0A0A0MS00 114 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 LINC01387J3KSC0 135 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 MTRF1O75570 445 aaKnown RBP12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 GRPP07492 148 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 ATF1P18846 271 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 PSG4Q00888 419 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 TRAM1Q15629 374 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 GSG1Q2KHT4 349 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 DMKNQ6E0U4 476 aaPredicted RBP12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 SFRP4Q6FHJ7 346 aaPredicted RBP12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 PRSS35Q8N3Z0 413 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 SNRNP40Q96DI7 357 aaKnown RBP12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 TMEM38BQ9NVV0 291 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 HIVEP3Q5T1R4 2406 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 A0A0G2JMP0 313 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 A0A0X1KG70 313 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 OR4C45A6NMZ5 311 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 HPNP05981 417 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 KIR3DL2P43630 455 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 NKX2-5P52952 324 aaPredicted RBP12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 SCGB2B2Q4G0G5 96 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 OR4M2Q8NGB6 313 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 LIPHQ8WWY8 451 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 SLC25A46Q96AG3 418 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 REEP6Q96HR9 211 aa12.51□□□□□ -0.41
SEMA6C-204ENST00000368914 NOTOA8MTQ0 251 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF701M0R085 212 aaPredicted RBP12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 DKK1O94907 266 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 KDM4BO94953 1096 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 ELK1P19419 428 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 IGFBP7Q16270 282 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 SLC7A11Q9UPY5 501 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF462Q96JM2 2506 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 CENPXA8MT69 81 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF93P35789 620 aaPredicted RBP12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 NKPD1Q17RQ9 610 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 BRICD5Q6PL45 260 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 SF3B5Q9BWJ5 86 aaKnown RBP12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 JAM3Q9BX67 310 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 CYB5R1Q9UHQ9 305 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 C5orf63A6NC05 138 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 TRIM64CA6NLI5 447 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 CYB5AP00167 134 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 VEGFCP49767 419 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 SLC25A53Q5H9E4 307 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 SLC25A47Q6Q0C1 308 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 FAM214BQ7L5A3 538 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 OR4M1Q8NGD0 313 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 CHMP1AQ9HD42 196 aaPredicted RBP12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF701Q9NV72 531 aaPredicted RBP12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 TREM2Q9NZC2 230 aa12.5□□□□□ -0.41
SEMA6C-204ENST00000368914 ZZEF1O43149 2961 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 SPRY1O43609 319 aaPredicted RBP12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 FZD7O75084 574 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 NGFP01138 241 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 STOMP27105 288 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 PITPNBP48739 271 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 ART1P52961 327 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 FBXW9Q5XUX1 488 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 ST6GALNAC2Q9UJ37 374 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 PMF1-BGLAPU3KQ54 211 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 BDKRB2P30411 391 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 RSU1Q15404 277 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 UNQ6494/PRO21346Q6UXR6 183 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF629Q9UEG4 869 aaPredicted RBP12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 UGT2A1Q9Y4X1 527 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 FAM221AA4D161 298 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF716A6NP11 495 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 CYTIPO60759 359 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 APOC1P02654 83 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 GRB2P62993 217 aaKnown RBP12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 PLET1Q6UQ28 207 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 AKAP14Q86UN6 197 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 PRR18Q8N4B5 295 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 TOMM5Q8N4H5 51 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 RBMXL3Q8N7X1 1067 aaKnown RBP12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF611Q8N823 705 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 OR52N4Q8NGI2 321 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 MRPS18AQ9NVS2 196 aaKnown RBP12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 QPCTLQ9NXS2 382 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 SHANK1Q9Y566 2161 aa12.49□□□□□ -0.41
SEMA6C-204ENST00000368914 ZNF850A8MQ14 1090 aa12.48□□□□□ -0.41
SEMA6C-204ENST00000368914 A8MV72 311 aaPredicted RBP12.48□□□□□ -0.41
SEMA6C-204ENST00000368914 ADAM10O14672 748 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms