RNA–Protein interactions for RNA: ENST00000368463.7

PBXIP1-202, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBXIP1, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-202ENST00000368463 DHPSP49366 369 aaPredicted RBP12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 FABP9Q0Z7S8 132 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 PDCD1Q15116 288 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 OR8U1Q8NH10 309 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 GLYATL2Q8WU03 294 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 TOMM40LQ969M1 308 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 REEP6Q96HR9 211 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 DOCK7Q96N67 2140 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 MUC3AQ02505 3323 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 ZNF407Q9C0G0 2248 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 PCDH15Q96QU1 1955 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 ZNF878C9JN71 531 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 EFSO43281 561 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 XRCC2O43543 280 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 FOXS1O43638 330 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 NDUFS6O75380 124 aaKnown RBP12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 PRH1P02810 166 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 CRHP06850 196 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 OR13C7P0DN81 318 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 RFC3P40938 356 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 GPR3P46089 330 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 UNC119Q13432 240 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 ZNF528Q3MIS6 628 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 FAM24BQ8N5W8 94 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 TMEM229BQ8NBD8 167 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 PRRT1Q99946 306 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 PRMT8Q9NR22 394 aaPredicted RBP12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 PCDHGA1Q9Y5H4 931 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 RAB19A4D1S5 217 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 FAM221BA6H8Z2 402 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 RAB27BO00194 218 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 FABP1P07148 127 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 SPINK2P20155 84 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 NTSR1P30989 418 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 SKP2Q13309 424 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 C9orf152Q5JTZ5 239 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 APCDD1LQ8NCL9 501 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 SCARF2Q96GP6 870 aaPredicted RBP12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 UTP23Q9BRU9 249 aaKnown RBP12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 FBXO7Q9Y3I1 522 aa12.86□□□□□ -0.35
PBXIP1-202ENST00000368463 PLRG1O43660 514 aaKnown RBP12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 APOC1P02654 83 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 PNMTP11086 282 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 GLO1Q04760 184 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 NSDHLQ15738 373 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 ZNF141Q15928 474 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 MICBQ29980 383 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 GLIPR1L1Q6UWM5 242 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 OR1M1Q8NGA1 313 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 A0A1W2PPH5 198 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 DIRAS3O95661 229 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 VSIG8P0DPA2 414 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 AMY2BP19961 511 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 OR3A4PP47883 348 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 HOXA1P49639 335 aaPredicted RBP12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 TLE1Q04724 770 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 TSPO2Q5TGU0 170 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 EXD3Q8N9H8 876 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 PMM1Q92871 262 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 ELSPBP1Q96BH3 223 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 BCL2L14Q9BZR8 327 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 COA4Q9NYJ1 87 aa12.85□□□□□ -0.35
PBXIP1-202ENST00000368463 GP1BBP13224 206 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 CSRP1P21291 193 aaKnown RBP12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 FOXK1P85037 733 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 PLCXD2Q0VAA5 305 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 MPPED2Q15777 294 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 FAM69BQ5VUD6 431 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 CLEC18BQ6UXF7 455 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 Q6ZRG5 221 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 LRRC75AQ8NAA5 344 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 HSD17B11Q8NBQ5 300 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 RNF128Q8TEB7 428 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 MRI1Q9BV20 369 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 GHRLQ9UBU3 117 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 CYP8B1Q9UNU6 501 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 RNASEK-C17orf49H0YIS7 233 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 FXYD4P59646 89 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 ZNF248Q8NDW4 579 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 OR10H5Q8NGA6 315 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 ARHGAP5-AS1Q96IT6 56 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 TAF9BQ9HBM6 251 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 ZNF275Q9NSD4 429 aaPredicted RBP12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 COL6A3P12111 3177 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 NPIPA5E9PKD4 350 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 ZNF20P17024 532 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 SERPINA2P20848 420 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 ZNF93P35789 620 aaPredicted RBP12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 SLC6A9P48067 706 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 RPL27P61353 136 aaKnown RBP12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 POLR2GP62487 172 aaKnown RBP eCLIP12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 CSNK2A1P68400 391 aaPredicted RBP12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 EGR3Q06889 387 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 HNF4GQ14541 408 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 EIF2S3LQ2VIR3 472 aaKnown RBP12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 ANKRD55Q3KP44 614 aa12.84□□□□□ -0.35
PBXIP1-202ENST00000368463 MAMDC2Q7Z304 686 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms