RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 THBS4P35443 961 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 CLDN6P56747 220 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 TCTAP57738 103 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 CRYZQ08257 329 aaKnown RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 WBP2NLQ6ICG8 309 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 SYNPRQ8TBG9 265 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF775Q96BV0 537 aaPredicted RBP7.87□□□□□ -1.15
SYNE1-206ENST00000367253 F2RL3Q96RI0 385 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 PDCD1LG2Q9BQ51 273 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 TREM2Q9NZC2 230 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 DMRT1Q9Y5R6 373 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF318Q5VUA4 2279 aa7.87□□□□□ -1.15
SYNE1-206ENST00000367253 ABLIM3O94929 683 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF250P15622 560 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ARSBP15848 533 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 GSG1Q2KHT4 349 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 HENMT1Q5T8I9 393 aaKnown RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 PLBD1Q6P4A8 553 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 RTN4RL1Q86UN2 441 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 SMRP1Q8NCR6 262 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 OR6F1Q8NGZ6 308 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 SLC37A2Q8TED4 501 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 SLC7A6Q92536 515 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 OPALINQ96PE5 141 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 FAM53CQ9NYF3 392 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 C5AR2Q9P296 337 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 RCE1Q9Y256 329 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CXorf65A6NEN9 183 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF729A6NN14 1252 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 C17orf112F2Z3M2 114 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 HRO43593 1189 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CTNSO60931 367 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 FAHP16930 419 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 TACR1P25103 407 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 DDOSTP39656 456 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 SOX3P41225 446 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ETFDHQ16134 617 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 KCNMB1Q16558 191 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 FAM74A1Q5RGS3 127 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 RNLSQ5VYX0 342 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 IL34Q6ZMJ4 242 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 SLC35G3Q8N808 338 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 OR4M1Q8NGD0 313 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 SFXN5Q8TD22 340 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 NUDT8Q8WV74 236 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CCL19Q99731 98 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 BABAM2Q9NXR7 383 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 C9orf172C9J069 976 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 SYT7O43581 403 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 RAB40ALP0C0E4 278 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ATXN1LP0C7T5 689 aaKnown RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ZP3P21754 424 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 EBPQ15125 230 aaKnown RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 P2RY14Q15391 338 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF77Q15935 545 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF528Q3MIS6 628 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 LHX8Q68G74 356 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 APOOLQ6UXV4 268 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 MOB3CQ70IA8 216 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 GLCCI1Q86VQ1 547 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 OR4K5Q8NGD3 323 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 OR52E2Q8NGJ4 325 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 RAB40AQ8WXH6 277 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ALG12Q9BV10 488 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ST6GALNAC5Q9BVH7 336 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ALX4Q9H161 411 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF331Q9NQX6 463 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CTSFQ9UBX1 484 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 POMT2Q9UKY4 750 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 RASD1Q9Y272 281 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 DDX60LQ5H9U9 1706 aaKnown RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM82A0PJX8 343 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CLDN24A6NM45 220 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 H0YIG0 161 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 C16orf97H3BN30 126 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 XRCC2O43543 280 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 GP1BAP07359 652 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 NPPBP16860 134 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CRHBPP24387 322 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 GDF5P43026 501 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CSN1S1P47710 185 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CAPZBP47756 277 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CLDN17P56750 224 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CD81P60033 236 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 CXCR4P61073 352 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 SELENBP1Q13228 472 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 FAM162BQ5T6X4 162 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 HSD17B11Q8NBQ5 300 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 OR5W2Q8NH69 310 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM59LQ9UK28 342 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 HS3ST2Q9Y278 367 aa7.86□□□□□ -1.15
SYNE1-206ENST00000367253 TPRP12270 2363 aaKnown RBP7.86□□□□□ -1.15
SYNE1-206ENST00000367253 IGKV6D-21A0A0A0MT36 114 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 H0Y980 276 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 SCG5P05408 212 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 SLC35E2BP0CK96 405 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 PPP2CBP62714 309 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ACSM1Q08AH1 577 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 GGTLC2Q14390 218 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF266Q14584 549 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms