RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 PAX8Q06710 450 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 MALLQ13021 153 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF404Q494X3 552 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PGAP1Q75T13 922 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ADGRG5Q8IZF4 528 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZDHHC22Q8N966 263 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CCDC197Q8NCU1 140 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 OR2T33Q8NG76 320 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SPTSSAQ969W0 71 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ERGIC1Q969X5 290 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CLPTM1LQ96KA5 538 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SLC6A7Q99884 636 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 TMEM246Q9BRR3 403 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 REEP1Q9H902 201 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 MARCH7Q9H992 704 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CMC2Q9NRP2 79 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ARMC1Q9NVT9 282 aa11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SAMHD1Q9Y3Z3 626 aaKnown RBP11.44□□□□□ -0.58
TNFRSF1A-202ENST00000366159 IGHV3-64DA0A0J9YX35 117 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 TMEM89A2RUT3 159 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ARRDC5A6NEK1 342 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CD300LBA8K4G0 201 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF593O00488 134 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 RGS9O75916 674 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF205O95201 554 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SOX14O95416 240 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FMO3P31513 532 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CD80P33681 288 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 MPPED2Q15777 294 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FAM201AQ5SY85 155 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 GLYATL3Q5SZD4 288 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF841Q6ZN19 808 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 TMEM179BQ7Z7N9 219 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 KLBQ86Z14 1044 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 OR10G2Q8NGC3 310 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SPSB4Q96A44 273 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SLAMF6Q96DU3 332 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FEVQ99581 238 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 KCNJ15Q99712 375 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CHID1Q9BWS9 393 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SUCNR1Q9BXA5 334 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FAM53CQ9NYF3 392 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 MIOXQ9UGB7 285 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 AUP1Q9Y679 476 aa11.43□□□□□ -0.58
TNFRSF1A-202ENST00000366159 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 GMDSO60547 372 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PPIAL4GP0DN37 164 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CA6P23280 308 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 BLVRAP53004 296 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ESCO2Q56NI9 601 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PRSS45Q7RTY3 260 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 MRPL21Q7Z2W9 205 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 C1orf87Q8N0U7 546 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PLPP7Q8NBV4 271 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 OR2AE1Q8NHA4 323 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CANT1Q8WVQ1 401 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 JMJD8Q96S16 334 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SSBP3Q9BWW4 388 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SLC22A4Q9H015 551 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 MRPL15Q9P015 296 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 NUP50Q9UKX7 468 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PPIAL4AQ9Y536 164 aa11.42□□□□□ -0.58
TNFRSF1A-202ENST00000366159 DHRS12A0PJE2 317 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 AQP12BA6NM10 295 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 LRRC30A6NM36 301 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF878C9JN71 531 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 TRIM77I1YAP6 450 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FAM20BO75063 409 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CST1P01037 141 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SPARCP09486 303 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 GRK5P34947 590 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PSMB10P40306 273 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PRKXP51817 358 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 PRAMEF6Q5VXH4 476 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 LYPD2Q6UXB3 125 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 RHOUQ7L0Q8 258 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 AQP12AQ8IXF9 295 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 GIPC3Q8TF64 312 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 RNF133Q8WVZ7 376 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SPRYD4Q8WW59 207 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 NEIL1Q96FI4 390 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 NTN4Q9HB63 628 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 ZNF69Q9UC07 566 aa11.41□□□□□ -0.58
TNFRSF1A-202ENST00000366159 IGHV2-70DA0A0C4DH43 119 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 KIR2DS1A0A191URI9 304 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FAM183AA6NL82 134 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 IFNGP01579 166 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SLC2A1P11166 492 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 RPS2P15880 293 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 FPR2P25090 351 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CFPP27918 469 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 HOXA4Q00056 320 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 OR8G1Q15617 311 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 DOK3Q7L591 496 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 TIGD4Q8IY51 512 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 BPIFB2Q8N4F0 458 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 IQCF1Q8N6M8 205 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 RAB40AQ8WXH6 277 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 C22orf15Q8WYQ4 148 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms