RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 TFAP2AP05549 437 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 ENDOGQ14249 297 aaKnown RBP18.37■□□□□ 0.53
SMURF1-202ENST00000361368 RHOUQ7L0Q8 258 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 FGF14Q92915 247 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 LRRC61Q9BV99 259 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 ST3GAL6Q9Y274 331 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 ATP6V1G2-DDX39BF2Z307 99 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 IGLV3-25P01717 112 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 S100A8P05109 93 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 THBS4P35443 961 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 RFC3P40938 356 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 ASTLQ6HA08 431 aaPredicted RBP18.37■□□□□ 0.53
SMURF1-202ENST00000361368 ZNF705AQ6ZN79 300 aaPredicted RBP18.37■□□□□ 0.53
SMURF1-202ENST00000361368 CDCA4Q9BXL8 241 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 OR5H6Q8NGV6 325 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 POM121L2Q96KW2 1035 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 PLA2G12AQ9BZM1 189 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 CHD2O14647 1828 aaKnown RBP18.37■□□□□ 0.53
SMURF1-202ENST00000361368 TIAM2Q8IVF5 1701 aa18.37■□□□□ 0.53
SMURF1-202ENST00000361368 CCSO14618 274 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 SLC31A2O15432 143 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 SSSCA1O60232 199 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 SMIM19Q96E16 107 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 FOXB1Q99853 325 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 ZC3H12DA2A288 527 aaKnown RBP18.36■□□□□ 0.53
SMURF1-202ENST00000361368 ZAR1LA6NP61 321 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 LINC01565O15544 149 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 FCMRO60667 390 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 OR5H8P0DN80 308 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 GSG1Q2KHT4 349 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 OTUD1Q5VV17 481 aaPredicted RBP18.36■□□□□ 0.53
SMURF1-202ENST00000361368 TRILQ7L0X0 811 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 MOB3BQ86TA1 216 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 GAR1Q9NY12 217 aaKnown RBP18.36■□□□□ 0.53
SMURF1-202ENST00000361368 PSENENQ9NZ42 101 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 TRBV5-4A0A0C4DH59 114 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 OR5I1Q13606 314 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 OR4F5Q8NH21 305 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 OR4F4Q96R69 305 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 TMEM30CPA0ZSE6 113 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 CEACAM16Q2WEN9 425 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 ACSM5Q6NUN0 579 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 ABI3BPQ7Z7G0 1075 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 ARHGEF39Q8N4T4 335 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 WSB2Q9NYS7 404 aaPredicted RBP18.36■□□□□ 0.53
SMURF1-202ENST00000361368 TMEM235A6NFC5 223 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 KLK8O60259 260 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 PDGFBP01127 241 aaPredicted RBP18.36■□□□□ 0.53
SMURF1-202ENST00000361368 HCCSP53701 268 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 CHST2Q9Y4C5 530 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 CITO14578 2027 aa18.36■□□□□ 0.53
SMURF1-202ENST00000361368 GOSR1O95249 250 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 ATF1P18846 271 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 EMDP50402 254 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 FAM122CQ6P4D5 195 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 GPR78Q96P69 363 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 MAGEB4O15481 346 aaPredicted RBP18.35■□□□□ 0.53
SMURF1-202ENST00000361368 TRAPPC2P0DI81 140 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 TRAPPC2BP0DI82 140 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 MPLP40238 635 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 PPP1CAP62136 330 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 TOMM34Q15785 309 aaPredicted RBP18.35■□□□□ 0.53
SMURF1-202ENST00000361368 PNLIPRP3Q17RR3 467 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 KIAA1958Q8N8K9 716 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 OR2A1Q8NGT9 310 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 OCIAD1Q9NX40 245 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 ZNF835Q9Y2P0 537 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 MYH10P35580 1976 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 OPRM1P35372 400 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 AKR1C3P42330 323 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 TOR2AQ5JU69 321 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 MZB1Q8WU39 189 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 PP6455Q8WZ26 134 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 R3HDMLQ9H3Y0 253 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 PIAS2O75928 621 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 NME1P15531 152 aaKnown RBP18.35■□□□□ 0.53
SMURF1-202ENST00000361368 GABRG2P18507 467 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 SSBP1Q04837 148 aaKnown RBP18.35■□□□□ 0.53
SMURF1-202ENST00000361368 RBPMSQ93062 196 aaKnown RBP18.35■□□□□ 0.53
SMURF1-202ENST00000361368 LHX4Q969G2 390 aa18.35■□□□□ 0.53
SMURF1-202ENST00000361368 ZNF121P58317 390 aaPredicted RBP18.34■□□□□ 0.53
SMURF1-202ENST00000361368 LYPD8Q6UX82 237 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 ACOT7LQ6ZUV0 252 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 V9GYS6 101 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 SPRY3O43610 288 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 SLC2A10O95528 541 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 P2RX3P56373 397 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 AKR1E2Q96JD6 320 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 YTHDF2Q9Y5A9 579 aaKnown RBP18.34■□□□□ 0.53
SMURF1-202ENST00000361368 LAMB4A4D0S4 1761 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 TGOLN2O43493 480 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 MFSD4AQ8N468 514 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 SARGQ9BW04 601 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 MYO10Q9HD67 2058 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 LRRC3CA6NJW4 275 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 HPP00738 406 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 CDK5R1Q15078 307 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 LYSMD2Q8IV50 215 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 NHLRC2Q8NBF2 726 aa18.34■□□□□ 0.53
SMURF1-202ENST00000361368 CA5BP1Q8WTZ4 195 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms