RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ZNF41P51814 821 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 TAS2R31P59538 309 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 SPIN3Q5JUX0 258 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 RPL7L1Q6DKI1 246 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 MEX3BQ6ZN04 569 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 Q6ZRG5 221 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 FAM71E2Q8N5Q1 922 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 OR13C8Q8NGS7 320 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 SCGB3A2Q96PL1 93 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 USB1Q9BQ65 265 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 C1orf198Q9H425 327 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF275Q9NSD4 429 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 MRPL22Q9NWU5 206 aaKnown RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 PPP4R1LQ9P1A2 415 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ASH2LQ9UBL3 628 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 LHX6Q9UPM6 363 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 PUS1Q9Y606 427 aaKnown RBP eCLIP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 CHD7Q9P2D1 2997 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 TRBV5-7A0A0A0MS05 114 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 TRAV20A0A0B4J274 112 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 CCDC85CA6NKD9 419 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 IL33O95760 270 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ABHD16AO95870 558 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 OR13C7P0DN81 318 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 ASCL1P50553 236 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 RIPPLY1Q0D2K3 151 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 LANCL3Q6ZV70 420 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 RTN4RL2Q86UN3 420 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 EXD3Q8N9H8 876 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 FNDC9Q8TBE3 224 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 TCTN2Q96GX1 697 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 RSRP1Q9BUV0 290 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 S1PR5Q9H228 398 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 GPR84Q9NQS5 396 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 PRMT8Q9NR22 394 aaPredicted RBP5.88□□□□□ -1.47
CSDE1-203ENST00000358528 PLEKHJ1Q9NW61 149 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 FBXO7Q9Y3I1 522 aa5.88□□□□□ -1.47
CSDE1-203ENST00000358528 DNAH14Q0VDD8 3507 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 A0A1W2PQF6 199 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 PRSS44E7EML9 344 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 SULT2B1O00204 365 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 XRCC2O43543 280 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 TPPPO94811 219 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 NXPH3O95157 252 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 DIRAS3O95661 229 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 ACTL6AO96019 429 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 APOC1P02654 83 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 CRHP06850 196 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 SFTA3P0C7M3 94 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 OPRM1P35372 400 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 TNFRSF4P43489 277 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 CBX5P45973 191 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 SLC26A5P58743 744 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 TGIF1Q15583 401 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 SGCBQ16585 318 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 SP6Q3SY56 376 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 P4HA3Q7Z4N8 544 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 OR5AP2Q8NGF4 316 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 C11orf40Q8WZ69 217 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 MCHR2Q969V1 340 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 ARHGAP5-AS1Q96IT6 56 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF285Q96NJ3 590 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 RTN4RQ9BZR6 473 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 PBOV1Q9GZY1 135 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 LAT2Q9GZY6 243 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.87□□□□□ -1.47
CSDE1-203ENST00000358528 UQCC1Q9NVA1 299 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 KCNK7Q9Y2U2 307 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 TMEM184BQ9Y519 407 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-203ENST00000358528 CDH23Q9H251 3354 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 FAM230AA0A1W2PPH8 454 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 RNF222A6NCQ9 220 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 STMND1H3BQB6 276 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 TNFRSF10CO14798 259 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 OR8U9P0C7N5 309 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 JMJD7P0C870 316 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 OR3A4PP47883 348 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 DAP3P51398 398 aaKnown RBP5.87□□□□□ -1.47
CSDE1-203ENST00000358528 YPEL5P62699 121 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 DHODHQ02127 395 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 CSRP2Q16527 193 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 PHLDA2Q53GA4 152 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 BIVMQ86UB2 503 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 NAA40Q86UY6 237 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 SULF2Q8IWU5 870 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 UEVLDQ8IX04 471 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 SUMF1Q8NBK3 374 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 TERB2Q8NHR7 220 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 RXFP4Q8TDU9 374 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 ADAT3Q96EY9 351 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-203ENST00000358528 RBM24Q9BX46 236 aaKnown RBP5.87□□□□□ -1.47
CSDE1-203ENST00000358528 ZNF304Q9HCX3 659 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 OR5AC2Q9NZP5 309 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 A6NIZ1 184 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 OR6C65A6NJZ3 312 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 MPTX1A8MV57 137 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 RNASEK-C17orf49H0YIS7 233 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 MTRF1O75570 445 aaKnown RBP5.87□□□□□ -1.47
CSDE1-203ENST00000358528 CD1AP06126 327 aa5.87□□□□□ -1.47
CSDE1-203ENST00000358528 VSIG8P0DPA2 414 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms