RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 NANOS3P60323 173 aaKnown RBP12.78□□□□□ -0.36
CCNE1-202ENST00000357943 RGS7BPQ6MZT1 257 aaPredicted RBP12.78□□□□□ -0.36
CCNE1-202ENST00000357943 TMEM200AQ86VY9 491 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 KLBQ86Z14 1044 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 PRSS35Q8N3Z0 413 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 OR8B12Q8NGG6 310 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 MARS2Q96GW9 593 aaKnown RBP12.78□□□□□ -0.36
CCNE1-202ENST00000357943 PGAM5Q96HS1 289 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 MND1Q9BWT6 205 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 PBOV1Q9GZY1 135 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 PTTG3PQ9NZH4 202 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 OR52A1Q9UKL2 312 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 SLC22A13Q9Y226 551 aa12.78□□□□□ -0.36
CCNE1-202ENST00000357943 PLCE1Q9P212 2302 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 FABP6P51161 128 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 WNT4P56705 351 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 PRSS12P56730 875 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF92Q03936 586 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 HLXQ14774 488 aaPredicted RBP12.77□□□□□ -0.36
CCNE1-202ENST00000357943 ADIPOQQ15848 244 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 GFOD2Q3B7J2 385 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 WDR38Q5JTN6 314 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 GLYATL3Q5SZD4 288 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 LRP11Q86VZ4 500 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 CATSPERDQ86XM0 798 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 EGFL6Q8IUX8 553 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 OR52H1Q8NGJ2 320 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 KLF14Q8TD94 323 aaPredicted RBP12.77□□□□□ -0.36
CCNE1-202ENST00000357943 OR5M11Q96RB7 305 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF442Q9H7R0 627 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 PLEKHF2Q9H8W4 249 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 BABAM2Q9NXR7 383 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 FRRS1LQ9P0K9 344 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 NUFIP1Q9UHK0 495 aaKnown RBP12.77□□□□□ -0.36
CCNE1-202ENST00000357943 LSM2Q9Y333 95 aaKnown RBP12.77□□□□□ -0.36
CCNE1-202ENST00000357943 SNX5Q9Y5X3 404 aa12.77□□□□□ -0.36
CCNE1-202ENST00000357943 ATE1O95260 518 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 TTRP02766 147 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 OR4A8P0C604 315 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 MPV17P39210 176 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 RPL5P46777 297 aaKnown RBP12.77□□□□□ -0.37
CCNE1-202ENST00000357943 GBX2P52951 348 aaPredicted RBP12.77□□□□□ -0.37
CCNE1-202ENST00000357943 RPS23P62266 143 aaKnown RBP12.77□□□□□ -0.37
CCNE1-202ENST00000357943 GK2Q14410 553 aaPredicted RBP12.77□□□□□ -0.37
CCNE1-202ENST00000357943 ODF4Q2M2E3 257 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 TMEM255AQ5JRV8 349 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 ZNF773Q6PK81 442 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 C1orf174Q8IYL3 243 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 SPARTQ8N0X7 666 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 OR5L1Q8NGL2 311 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 OR2G2Q8NGZ5 317 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 FBXW5Q969U6 566 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 SGK3Q96BR1 496 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 COG8Q96MW5 612 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 SOX7Q9BT81 388 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 OR10A2Q9H208 303 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 MOB1AQ9H8S9 216 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 SP140LQ9H930 580 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 UBTD1Q9HAC8 227 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 DUSP13Q9UII6 198 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 CMAHPQ9Y471 501 aa12.77□□□□□ -0.37
CCNE1-202ENST00000357943 VPS13CQ709C8 3753 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 ACOD1A6NK06 481 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 HS3ST1O14792 307 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 ZNF250P15622 560 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 APOBEC3AP31941 199 aaPredicted RBP12.76□□□□□ -0.37
CCNE1-202ENST00000357943 KIR3DL2P43630 455 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 EMX1Q04741 257 aaPredicted RBP12.76□□□□□ -0.37
CCNE1-202ENST00000357943 MALLQ13021 153 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 MED22Q15528 200 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 TIGD6Q17RP2 521 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 ZNF718Q3SXZ3 478 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 BCL2L15Q5TBC7 163 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 ELMOD2Q8IZ81 293 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 MRPL24Q96A35 216 aaKnown RBP12.76□□□□□ -0.37
CCNE1-202ENST00000357943 REEP6Q96HR9 211 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 LYZL4Q96KX0 146 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 DHRS9Q9BPW9 319 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 SYT3Q9BQG1 590 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
CCNE1-202ENST00000357943 ACOT13Q9NPJ3 140 aa12.76□□□□□ -0.37
CCNE1-202ENST00000357943 SIRT4Q9Y6E7 314 aaPredicted RBP12.76□□□□□ -0.37
CCNE1-202ENST00000357943 XRCC2O43543 280 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 MRPS14O60783 128 aaKnown RBP12.75□□□□□ -0.37
CCNE1-202ENST00000357943 PCMT1P22061 227 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 SSTR2P30874 369 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 TTKP33981 857 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 TGM4P49221 684 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 KRTAP10-9P60411 292 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 PSG7Q13046 419 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 MRPL28Q13084 256 aaKnown RBP12.75□□□□□ -0.37
CCNE1-202ENST00000357943 ALKBH1Q13686 389 aaKnown RBP12.75□□□□□ -0.37
CCNE1-202ENST00000357943 SPHARQ15513 63 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 TBCEQ15813 527 aaPredicted RBP12.75□□□□□ -0.37
CCNE1-202ENST00000357943 MBNL2Q5VZF2 373 aaKnown RBP12.75□□□□□ -0.37
CCNE1-202ENST00000357943 ZNF544Q6NX49 715 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 FDX2Q6P4F2 183 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 FBXW12Q6X9E4 464 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 PGAP1Q75T13 922 aa12.75□□□□□ -0.37
CCNE1-202ENST00000357943 MUC15Q8N387 334 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms