RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 VCX3BQ9H321 246 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 MOB1AQ9H8S9 216 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ADGRL4Q9HBW9 690 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 FAM118AQ9NWS6 357 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 CLN6Q9NWW5 311 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 NKIRAS2Q9NYR9 191 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 MYEF2Q9P2K5 600 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 PURGQ9UJV8 347 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 FZR1Q9UM11 496 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 KLHDC2Q9Y2U9 406 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 NOP16Q9Y3C1 178 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 PLCE1Q9P212 2302 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 LOC100130705A0A1B0GUX0 176 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 C17orf100A8MU93 164 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 IQCF6A8MYZ5 107 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 F5H5K5 113 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 H0YHG0 523 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 DLGAP1O14490 977 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 TIMM8AO60220 97 aaPredicted RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF254O75437 659 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 CLPTM1O96005 669 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 NGFP01138 241 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 LCATP04180 440 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 CD55P08174 381 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ADRA2AP08913 450 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 SBK2P0C263 348 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 SLC25A16P16260 332 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 GABRB1P18505 474 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ALOX5APP20292 161 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 CFL1P23528 166 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 DCTDP32321 178 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ALDH3B1P43353 468 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 SLC6A9P48067 706 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ACTC1P68032 377 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ACTA1P68133 377 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 MRPS11P82912 194 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ROM1Q03395 351 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 SLC34A1Q06495 639 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 EGR3Q06889 387 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 MAD2L1BPQ15013 274 aaPredicted RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 CLEC12BQ2HXU8 276 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 RSPO1Q2MKA7 263 aaPredicted RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF691Q5VV52 312 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 LPCAT4Q643R3 524 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 KCTD18Q6PI47 426 aaPredicted RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 CLEC2AQ6UVW9 174 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 DNM1P46Q6ZS02 220 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 MRPL21Q7Z2W9 205 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 BCDIN3DQ7Z5W3 292 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 SPSB4Q96A44 273 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 HAVCR1Q96D42 359 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 MRPL48Q96GC5 212 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 Q96MT0 163 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 OR8B4Q96RC9 309 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 AMELYQ99218 206 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 OR10A2Q9H208 303 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 MS4A5Q9H3V2 200 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 CENPMQ9NSP4 180 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 DUSP13Q9UII6 198 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF391Q9UJN7 358 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 COPS3Q9UNS2 423 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 STARD10Q9Y365 291 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 LRP12Q9Y561 859 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 HSPE1-MOB4S4R3N1 261 aa3.39□□□□□ -1.87
CNOT4-202ENST00000356162 ANKRD17O75179 2603 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 CHD3Q12873 2000 aaKnown RBP3.39□□□□□ -1.87
CNOT4-202ENST00000356162 A0A1B0GWJ7 208 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 PLSCR5A0PG75 271 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 IRGMA1A4Y4 181 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ZSCAN5BA6NJL1 495 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 H0YAE9 185 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 H0YJX3 145 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 NDUFS8O00217 210 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ENTPD6O75354 484 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ANXA2P07355 339 aaKnown RBP3.38□□□□□ -1.87
CNOT4-202ENST00000356162 OR2T7P0C7T2 308 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 TNFSF4P23510 183 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 CAPGP40121 348 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF81P51508 661 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 MMP15P51511 669 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 PRKXP51817 358 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 RIDAP52758 137 aaKnown RBP3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF121P58317 390 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ADARB1P78563 741 aaKnown RBP3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF91Q05481 1191 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 PSG7Q13046 419 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 RIPK1Q13546 671 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 SNCBQ16143 134 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 TMEM255AQ5JRV8 349 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 GLYATL3Q5SZD4 288 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 SPATC1Q76KD6 591 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF771Q7L3S4 317 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-202ENST00000356162 KRT77Q7Z794 578 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ENTHD1Q8IYW4 607 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 ZNF679Q8IYX0 411 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 GALNT4Q8N4A0 578 aa3.38□□□□□ -1.87
CNOT4-202ENST00000356162 DHRSXQ8N5I4 330 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms