RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 RNASEK-C17orf49H0YIS7 233 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 SNRNP70P08621 437 aaKnown RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 RORAP35398 523 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 KRBOX4Q5JUW0 171 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 CLEC18BQ6UXF7 455 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 MAMDC2Q7Z304 686 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 PPP1R3BQ86XI6 285 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 SLC30A7Q8NEW0 376 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 PTPMT1Q8WUK0 201 aaPredicted RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 TMEM230Q96A57 120 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 MESP1Q9BRJ9 268 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 MMP26Q9NRE1 261 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 LPAR3Q9UBY5 353 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 CARHSP1Q9Y2V2 147 aaKnown RBP9.03□□□□□ -0.96
PTPRA-203ENST00000356147 R4GMQ9 66 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 DOCK8Q8NF50 2099 aa9.03□□□□□ -0.96
PTPRA-203ENST00000356147 COLCA2A8K830 154 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 PHYHO14832 338 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 MBTPS2O43462 519 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 S100A6P06703 90 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 H2BFMP0C1H6 154 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 OR8U9P0C7N5 309 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 HNRNPA2B1P22626 353 aaKnown RBP9.02□□□□□ -0.96
PTPRA-203ENST00000356147 GLO1Q04760 184 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 SRSF4Q08170 494 aaKnown RBP9.02□□□□□ -0.96
PTPRA-203ENST00000356147 DHRS11Q6UWP2 260 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 TMPRSS9Q7Z410 1059 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 NAA40Q86UY6 237 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 OR8U1Q8NH10 309 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 ARL5BQ96KC2 179 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 NECAB3Q96P71 396 aaPredicted RBP9.02□□□□□ -0.96
PTPRA-203ENST00000356147 TBL1XR1Q9BZK7 514 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 DUSP15Q9H1R2 295 aaPredicted RBP9.02□□□□□ -0.96
PTPRA-203ENST00000356147 SLCO5A1Q9H2Y9 848 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 PLA2G2EQ9NZK7 142 aa9.02□□□□□ -0.96
PTPRA-203ENST00000356147 BRWD1Q9NSI6 2320 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 TRAV36DV7A0A075B6V5 113 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 A0A0A6YYD4 124 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 A6NLC8 198 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 F8VVB4 439 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 F8VWA3 439 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 RAD51DO75771 328 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 GNRH1P01148 92 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 FABP1P07148 127 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 CA3P07451 260 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 IL12BP29460 328 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 GFERP55789 205 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 CLDN6P56747 220 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 SLC37A1P57057 533 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 SMCO1Q147U7 214 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 PLAC9Q5JTB6 97 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 FDX2Q6P4F2 183 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 MYO7BQ6PIF6 2116 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 PGAP1Q75T13 922 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF440Q8IYI8 595 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 SEMA6DQ8NFY4 1073 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 LIPHQ8WWY8 451 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ASB17Q8WXJ9 295 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ASB13Q8WXK3 278 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 MRGPRX1Q96LB2 322 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 IP6K3Q96PC2 410 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 SULT4A1Q9BR01 284 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 SEC11CQ9BY50 192 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 MYOZ1Q9NP98 299 aaPredicted RBP9.02□□□□□ -0.97
PTPRA-203ENST00000356147 PCDH15Q96QU1 1955 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 TMED7-TICAM2A0A0A6YYA0 188 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ARPC4-TTLL3A0A0A6YYG9 625 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 hCG_1809904A0A1W2PP81 198 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 A0A1W2PR64 198 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 A0A1W2PRV1 198 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 SYT7O43581 403 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 CTSEP14091 401 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 OR2B8PP59922 312 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ROM1Q03395 351 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 TTLL10Q6ZVT0 673 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ARHGEF39Q8N4T4 335 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ZNF519Q8TB69 540 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 OR51E1Q8TCB6 317 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ADAM19Q9H013 955 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 TMEM100Q9NV29 134 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 ZMAT5Q9UDW3 170 aaKnown RBP9.02□□□□□ -0.97
PTPRA-203ENST00000356147 RAB22AQ9UL26 194 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 AMDHD2Q9Y303 409 aa9.02□□□□□ -0.97
PTPRA-203ENST00000356147 PRAMEF26H0Y7S4 382 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 H3BML4 177 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 IL33O95760 270 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 SCGB1D2O95969 90 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 ARG1P05089 322 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 GP1BBP13224 206 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 ABCD3P28288 659 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 OR3A4PP47883 348 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 FHITP49789 147 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 EFNA3P52797 238 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 POU3F1Q03052 451 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-203ENST00000356147 ARFRP1Q13795 201 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 FAM76BQ5HYJ3 339 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 GLIPR1L1Q6UWM5 242 aa9.01□□□□□ -0.97
PTPRA-203ENST00000356147 DEFB119Q8N690 84 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms