RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 PBOV1Q9GZY1 135 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 ACOXLQ9NUZ1 547 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 PTTG3PQ9NZH4 202 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 NUFIP1Q9UHK0 495 aaKnown RBP13.34□□□□□ -0.27
TRIM13-201ENST00000356017 FZR1Q9UM11 496 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 ERGIC3Q9Y282 383 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 PCDHGB5Q9Y5G0 923 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 DCHS2Q6V1P9 2916 aa13.34□□□□□ -0.27
TRIM13-201ENST00000356017 CELSR2Q9HCU4 2923 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 A0A1W2PPW3 197 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 SRSF10O75494 262 aaKnown RBP13.33□□□□□ -0.28
TRIM13-201ENST00000356017 PNPP00491 289 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 SELEP16581 610 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 C21orf33P30042 268 aaPredicted RBP13.33□□□□□ -0.28
TRIM13-201ENST00000356017 LIPAP38571 399 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 ETV1P50549 477 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 GK2Q14410 553 aaPredicted RBP13.33□□□□□ -0.28
TRIM13-201ENST00000356017 MSMPQ1L6U9 139 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 MST1LQ2TV78 715 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 RNLSQ5VYX0 342 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 MRPL21Q7Z2W9 205 aaKnown RBP13.33□□□□□ -0.28
TRIM13-201ENST00000356017 RORBQ92753 470 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 ITFG2Q969R8 447 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 SPSB4Q96A44 273 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 CMBLQ96DG6 245 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 SIGLEC11Q96RL6 698 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 REPIN1Q9BWE0 567 aaKnown RBP13.33□□□□□ -0.28
TRIM13-201ENST00000356017 CDCA4Q9BXL8 241 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 CXorf56Q9H5V9 222 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 CGGBP1Q9UFW8 167 aaPredicted RBP13.33□□□□□ -0.28
TRIM13-201ENST00000356017 ST6GALNAC2Q9UJ37 374 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 OR52A1Q9UKL2 312 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 GTF2A1LQ9UNN4 478 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 PMF1-BGLAPU3KQ54 211 aa13.33□□□□□ -0.28
TRIM13-201ENST00000356017 A0A0U1RQV5 110 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 TMEM129A0AVI4 362 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 CD8AP01732 235 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 KITLGP21583 273 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 EEF1B2P24534 225 aaKnown RBP13.32□□□□□ -0.28
TRIM13-201ENST00000356017 MPV17P39210 176 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 GBX2P52951 348 aaPredicted RBP13.32□□□□□ -0.28
TRIM13-201ENST00000356017 MVKQ03426 396 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 ZNF92Q03936 586 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 PSG7Q13046 419 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 HLXQ14774 488 aaPredicted RBP13.32□□□□□ -0.28
TRIM13-201ENST00000356017 GLYATL3Q5SZD4 288 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 BCL2L15Q5TBC7 163 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 OR8B12Q8NGG6 310 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 OR52N1Q8NH53 320 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 SGK3Q96BR1 496 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 PELI1Q96FA3 418 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 MS4A5Q9H3V2 200 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 LIME1Q9H400 295 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 POFUT1Q9H488 388 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 ISG20L2Q9H9L3 353 aaKnown RBP13.32□□□□□ -0.28
TRIM13-201ENST00000356017 CYSLTR2Q9NS75 346 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 RTTNQ86VV8 2226 aa13.32□□□□□ -0.28
TRIM13-201ENST00000356017 PLSCR5A0PG75 271 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 M0R233 179 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 MYL12BO14950 172 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 RGS10O43665 173 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 TIMM8AO60220 97 aaPredicted RBP13.31□□□□□ -0.28
TRIM13-201ENST00000356017 CLPTM1O96005 669 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 HTR1AP08908 422 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 DNASE1P24855 282 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 DDOSTP39656 456 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 MFGE8Q08431 387 aaPredicted RBP13.31□□□□□ -0.28
TRIM13-201ENST00000356017 NKPD1Q17RQ9 610 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 ZMAT1Q5H9K5 638 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 C11orf71Q6IPW1 123 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 FDX2Q6P4F2 183 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 CATSPERDQ86XM0 798 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 ELMOD2Q8IZ81 293 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 OR2AE1Q8NHA4 323 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 IGFBPL1Q8WX77 278 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 NRGNQ92686 78 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 NINJ1Q92982 152 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 REEP6Q96HR9 211 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 DYNLRB1Q9NP97 96 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 G6PC2Q9NQR9 355 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 PAK1IP1Q9NWT1 392 aaPredicted RBP13.31□□□□□ -0.28
TRIM13-201ENST00000356017 TAAR3PQ9P1P4 343 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 ZNF319Q9P2F9 582 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 CLEC2DQ9UHP7 191 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 PURGQ9UJV8 347 aaKnown RBP13.31□□□□□ -0.28
TRIM13-201ENST00000356017 NBPF19A0A087WUL8 3843 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 MRPS14O60783 128 aaKnown RBP13.31□□□□□ -0.28
TRIM13-201ENST00000356017 ADRA2AP08913 450 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 CD53P19397 219 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 PPOXP50336 477 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 CCR9P51686 369 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 GABARAPL2P60520 117 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 GFOD2Q3B7J2 385 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 CCDC58Q4VC31 144 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 PRSS48Q7RTY5 328 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 SPRYD4Q8WW59 207 aaPredicted RBP13.31□□□□□ -0.28
TRIM13-201ENST00000356017 BABAM2Q9NXR7 383 aa13.31□□□□□ -0.28
TRIM13-201ENST00000356017 MYEF2Q9P2K5 600 aaKnown RBP13.31□□□□□ -0.28
TRIM13-201ENST00000356017 ERVK-18Q9QC07 812 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms