RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 LGALSLQ3ZCW2 172 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 MKXQ8IYA7 352 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 C11orf40Q8WZ69 217 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF845Q96IR2 970 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 PARP12Q9H0J9 701 aaKnown RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 METTL9Q9H1A3 318 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF629Q9UEG4 869 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 TRGV5A0A0B4J1U4 118 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 LILRB5O75023 590 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 MAP2K6P52564 334 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 ATP1B3P54709 279 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 MTCP1P56278 107 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 FAM199XQ6PEV8 388 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 TMEM200AQ86VY9 491 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF709Q8N972 641 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 OR4S1Q8NGB4 309 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 GLYATL2Q8WU03 294 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 PPP1R1CQ8WVI7 109 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 PIGTQ969N2 578 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 CXorf58Q96LI9 332 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 OR2A5Q96R48 311 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF175Q9Y473 711 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 PCDHGA1Q9Y5H4 931 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 ERVH48-1M5A8F1 160 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 SERPINA7P05543 415 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 SULT1A3P0DMM9 295 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 SULT1A4P0DMN0 295 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 ZNF626Q68DY1 528 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 TSEN54Q7Z6J9 526 aaKnown RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 SPICQ8N5J4 248 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 SLAMF6Q96DU3 332 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 SPACA9Q96E40 222 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 SPIN2AQ99865 258 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 SPIN2BQ9BPZ2 258 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 B9D1Q9UPM9 204 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 R4GMQ9 66 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 IGHV5-51A0A0C4DH38 117 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 ANKRD20A5PA0PJZ0 165 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 BTBD17A6NE02 478 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 GSTZ1O43708 216 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 GABRA2P47869 451 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 CRYBA2P53672 197 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 TMEM81Q6P7N7 255 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 TMEM88Q6PEY1 159 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 LYG2Q86SG7 212 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 KCNRGQ8N5I3 272 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 OR1S1Q8NH92 325 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 TAF9BQ9HBM6 251 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 FAM212BQ9NTI7 297 aaPredicted RBP11.09□□□□□ -0.63
COLCA1-201ENST00000355430 CHRNA9Q9UGM1 479 aa11.09□□□□□ -0.63
COLCA1-201ENST00000355430 BCL2L11O43521 198 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 IFNA1P01562 189 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 DBHP09172 617 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 PNLIPP16233 465 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 PI3P19957 117 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 ALOX5APP20292 161 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 S100PP25815 95 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 CDKN2AP42771 156 aaKnown RBP11.08□□□□□ -0.64
COLCA1-201ENST00000355430 HSF1Q00613 529 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 CSRP2Q16527 193 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 WDR38Q5JTN6 314 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 SLC22A25Q6T423 547 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 MOB3CQ70IA8 216 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 OR4C3Q8NH37 302 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 PAPOLGQ9BWT3 736 aaKnown RBP11.08□□□□□ -0.64
COLCA1-201ENST00000355430 FLRT3Q9NZU0 649 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 FRG2CA6NGY1 282 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 RFPL4AA6NLU0 287 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 RFPL4AL1F8VTS6 287 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 SLC17A2O00624 439 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 PDGFBP01127 241 aaPredicted RBP11.08□□□□□ -0.64
COLCA1-201ENST00000355430 CRYAAP02489 173 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 PSMB6P28072 239 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 FLI1Q01543 452 aaPredicted RBP11.08□□□□□ -0.64
COLCA1-201ENST00000355430 MAML2Q8IZL2 1156 aaPredicted RBP11.08□□□□□ -0.64
COLCA1-201ENST00000355430 SLC38A6Q8IZM9 456 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 TMEM229BQ8NBD8 167 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 C3orf49Q96BT1 292 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 LINC00052Q96N35 136 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 CENPVL1A0A0U1RR11 272 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 A0A1W2PQF6 199 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 HSPB2A8KAH6 182 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 OGG1O15527 345 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 C19orf57Q0VDD7 668 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 HSPB2Q16082 182 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 OR4D6Q8NGJ1 314 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 OR52N5Q8NH56 324 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 MARCH1Q8TCQ1 289 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 ST8SIA1Q92185 356 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 KCNK15Q9H427 330 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 PLA2G3Q9NZ20 509 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 PUS1Q9Y606 427 aaKnown RBP eCLIP11.08□□□□□ -0.64
COLCA1-201ENST00000355430 TMEM272A0A1B0GTI8 110 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 TMEM127O75204 238 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 SELEP16581 610 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 SMUG1Q53HV7 270 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 NPSR1Q6W5P4 371 aa11.08□□□□□ -0.64
COLCA1-201ENST00000355430 LILRB2Q8N423 598 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms