RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ZNF735P0CB33 412 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 CCL3P10147 92 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 GABREP78334 506 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 MFGE8Q08431 387 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-204ENST00000353317 EIF3IQ13347 325 aaKnown RBP7.64□□□□□ -1.19
TRIM55-204ENST00000353317 HSPB2Q16082 182 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 MOGAT2Q3SYC2 334 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 LRRC37A5PQ49AS3 106 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 BEX5Q5H9J7 111 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 CLVS2Q5SYC1 327 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 DTX1Q86Y01 620 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF679Q8IYX0 411 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 TMEM229BQ8NBD8 167 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 OR5M8Q8NGP6 311 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 LRRC46Q96FV0 321 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF75AQ96N20 296 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 SLC25A21Q9BQT8 299 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-204ENST00000353317 ASCL3Q9NQ33 180 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 MRPL22Q9NWU5 206 aaKnown RBP7.64□□□□□ -1.19
TRIM55-204ENST00000353317 UPB1Q9UBR1 384 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 CGGBP1Q9UFW8 167 aaPredicted RBP7.64□□□□□ -1.19
TRIM55-204ENST00000353317 VDAC3Q9Y277 283 aa7.64□□□□□ -1.19
TRIM55-204ENST00000353317 DNAJC13O75165 2243 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF407Q9C0G0 2248 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 A0A0G2JMM0 328 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 A0A1B0GTI1 187 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 A0A1W2PPB8 328 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 A0A1W2PRS3 328 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 DCDC2BA2VCK2 349 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 FAM74A7A6NL05 159 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 KIR3DP1A8MWS1 328 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 CDRT15L2A8MXV6 281 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 OPN1LWP04000 364 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 UBBP0CG47 229 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 UBCP0CG48 685 aaKnown RBP7.63□□□□□ -1.19
TRIM55-204ENST00000353317 WT1P19544 449 aaPredicted RBP7.63□□□□□ -1.19
TRIM55-204ENST00000353317 HTR2CP28335 458 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 CENPAP49450 140 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 LUMP51884 338 aaPredicted RBP7.63□□□□□ -1.19
TRIM55-204ENST00000353317 MLF1P58340 268 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 RPS27AP62979 156 aaKnown RBP7.63□□□□□ -1.19
TRIM55-204ENST00000353317 UBA52P62987 128 aaKnown RBP7.63□□□□□ -1.19
TRIM55-204ENST00000353317 FAM74A3Q4VXF1 159 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 TMEM164Q5U3C3 297 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 ELP2Q6IA86 826 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 OR10K2Q6IF99 312 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 MOB3CQ70IA8 216 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 NUP54Q7Z3B4 507 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 RPS19BP1Q86WX3 136 aaKnown RBP7.63□□□□□ -1.19
TRIM55-204ENST00000353317 OR4S1Q8NGB4 309 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 OR51A2Q8NGJ7 313 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 OR13C8Q8NGS7 320 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 RNF128Q8TEB7 428 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 NTNG2Q96CW9 530 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 SEC22AQ96IW7 307 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 DNTTIP1Q9H147 329 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 TMEM185BQ9H7F4 350 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 SH2D2AQ9NP31 389 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 TAS2R4Q9NYW5 299 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 TAS2R3Q9NYW6 316 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 B9D1Q9UPM9 204 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 DHDHQ9UQ10 334 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 A0A0D9SG52 128 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 TTLL8A6PVC2 850 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 SULT1C2O00338 296 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 XKRYO14609 159 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 CCSO14618 274 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 DOK2O60496 412 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 CYB5AP00167 134 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 HLA-AP01891 365 aaKnown RBP7.63□□□□□ -1.19
TRIM55-204ENST00000353317 CSN2P05814 226 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 SPARCP09486 303 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 LIPCP11150 499 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 AGTR1P30556 359 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 DEFA5Q01523 94 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF169Q14929 603 aaPredicted RBP7.63□□□□□ -1.19
TRIM55-204ENST00000353317 TOMM20Q15388 145 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 EXT1Q16394 746 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 SCGB2B2Q4G0G5 96 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 GLT8D1Q68CQ7 371 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 C11orf87Q6NUJ2 197 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 KCNRGQ8N5I3 272 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 POC1BQ8TC44 478 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 OIT3Q8WWZ8 545 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 THRSPQ92748 146 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 MARC2Q969Z3 335 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 ARL5BQ96KC2 179 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF416Q9BWM5 594 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 KLRF1Q9NZS2 232 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 KLK13Q9UKR3 277 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 TNFSF18Q9UNG2 199 aa7.63□□□□□ -1.19
TRIM55-204ENST00000353317 PRSS37A4D1T9 235 aa7.62□□□□□ -1.19
TRIM55-204ENST00000353317 RNF222A6NCQ9 220 aa7.62□□□□□ -1.19
TRIM55-204ENST00000353317 ZNF736B4DX44 427 aaPredicted RBP7.62□□□□□ -1.19
TRIM55-204ENST00000353317 SLC16A7O60669 478 aa7.62□□□□□ -1.19
TRIM55-204ENST00000353317 NPIPB7O75200 414 aa7.62□□□□□ -1.19
TRIM55-204ENST00000353317 BGLAPP02818 100 aa7.62□□□□□ -1.19
TRIM55-204ENST00000353317 CTLA4P16410 223 aa7.62□□□□□ -1.19
TRIM55-204ENST00000353317 IGFBP3P17936 291 aaPredicted RBP7.62□□□□□ -1.19
TRIM55-204ENST00000353317 CNR1P21554 472 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms