RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 RABIFP47224 123 aa16.16■□□□□ 0.18
CTSB-202ENST00000353047 RPL7L1Q6DKI1 246 aaKnown RBP16.16■□□□□ 0.18
CTSB-202ENST00000353047 SLC36A1Q7Z2H8 476 aa16.16■□□□□ 0.18
CTSB-202ENST00000353047 FAM122BQ7Z309 247 aa16.16■□□□□ 0.18
CTSB-202ENST00000353047 HSD17B13Q7Z5P4 300 aaPredicted RBP16.16■□□□□ 0.18
CTSB-202ENST00000353047 TMEM104Q8NE00 496 aa16.16■□□□□ 0.18
CTSB-202ENST00000353047 LIN37Q96GY3 246 aaPredicted RBP16.16■□□□□ 0.18
CTSB-202ENST00000353047 WWTR1Q9GZV5 400 aa16.16■□□□□ 0.18
CTSB-202ENST00000353047 IGHV3-15A0A0B4J1V0 119 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 TMEM218A2RU14 115 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 RER1O15258 196 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 ANGPTL7O43827 346 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 TMEM176BQ3YBM2 270 aaPredicted RBP16.15■□□□□ 0.18
CTSB-202ENST00000353047 AVPI1Q5T686 147 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 UNQ9370/PRO34162Q6UXP9 181 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 CNOT1A5YKK6 2376 aaKnown RBP16.15■□□□□ 0.18
CTSB-202ENST00000353047 A0A1W2PPC1 479 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 HPP00738 406 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 INPP5JQ15735 1006 aaPredicted RBP16.15■□□□□ 0.18
CTSB-202ENST00000353047 REEP6Q96HR9 211 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTSB-202ENST00000353047 SLC5A6Q9Y289 635 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 RBM7Q9Y580 266 aaKnown RBP16.15■□□□□ 0.18
CTSB-202ENST00000353047 TRAV14DV4A0A0A6YYC5 116 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 A0A1W2PQF6 199 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 OR5K4A6NMS3 321 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 CRYBA1P05813 215 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 FGF2P09038 288 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 OR8U9P0C7N5 309 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 RPA2P15927 270 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 KIR2DL1P43626 348 aaPredicted RBP16.15■□□□□ 0.18
CTSB-202ENST00000353047 GPR3P46089 330 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 TSPO2Q5TGU0 170 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 TM4SF19Q96DZ7 209 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 ARHGAP5-AS1Q96IT6 56 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 URM1Q9BTM9 101 aaKnown RBP16.15■□□□□ 0.18
CTSB-202ENST00000353047 POLE3Q9NRF9 147 aa16.15■□□□□ 0.18
CTSB-202ENST00000353047 GDF2Q9UK05 429 aaPredicted RBP16.15■□□□□ 0.18
CTSB-202ENST00000353047 OR2T1O43869 369 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 RPS4Y1P22090 263 aaKnown RBP16.14■□□□□ 0.17
CTSB-202ENST00000353047 OR3A4PP47883 348 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 EGR3Q06889 387 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 DLX2Q07687 328 aaPredicted RBP16.14■□□□□ 0.17
CTSB-202ENST00000353047 Q6ZRG5 221 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 LDLRAD3Q86YD5 345 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 GPX8Q8TED1 209 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 RHOFQ9HBH0 211 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 TAF9BQ9HBM6 251 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 RASL12Q9NYN1 266 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 CTSFQ9UBX1 484 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 PRAMEF26H0Y7S4 382 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 K7EPK0 472 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 ARG1P05089 322 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 FCGR2AP12318 317 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 ZNF43P17038 809 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 ADH6P28332 368 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 C9orf135Q5VTT2 229 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 NAXDQ8IW45 347 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 FAM71E2Q8N5Q1 922 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 ASB17Q8WXJ9 295 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 ZNF524Q96C55 264 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 NXT1Q9UKK6 140 aaKnown RBP16.14■□□□□ 0.17
CTSB-202ENST00000353047 AMDHD2Q9Y303 409 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 ARPC4-TTLL3A0A0A6YYG9 625 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 TRIM77I1YAP6 450 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 GP1BAP07359 652 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 FLI1Q01543 452 aaPredicted RBP16.14■□□□□ 0.17
CTSB-202ENST00000353047 ZNF141Q15928 474 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 EIF5AL1Q6IS14 154 aaKnown RBP16.14■□□□□ 0.17
CTSB-202ENST00000353047 OR1M1Q8NGA1 313 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 ADAT3Q96EY9 351 aaPredicted RBP16.14■□□□□ 0.17
CTSB-202ENST00000353047 MEMO1Q9Y316 297 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 ZNF175Q9Y473 711 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 PCDHGA1Q9Y5H4 931 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 LAMA1P25391 3075 aa16.14■□□□□ 0.17
CTSB-202ENST00000353047 TTLL8A6PVC2 850 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 A8MVM7 634 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 HEXBP07686 556 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 BCKDHBP21953 392 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 SLC22A24Q8N4F4 322 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 RNF128Q8TEB7 428 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 TMEM234Q8WY98 164 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 C11orf40Q8WZ69 217 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 MRPL22Q9NWU5 206 aaKnown RBP16.13■□□□□ 0.17
CTSB-202ENST00000353047 NAGAP17050 411 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 RNF144BQ7Z419 303 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 TMEM217Q8N7C4 229 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 SECTM1Q8WVN6 248 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 RAB22AQ9UL26 194 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 KCNK7Q9Y2U2 307 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 PTPRZ1P23471 2315 aaPredicted RBP16.13■□□□□ 0.17
CTSB-202ENST00000353047 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 MSGN1A6NI15 193 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 WRBO00258 174 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 RPS10P46783 165 aaKnown RBP16.13■□□□□ 0.17
CTSB-202ENST00000353047 SKP2Q13309 424 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 CEBPEQ15744 281 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 ALKBH2Q6NS38 261 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 FNDC9Q8TBE3 224 aa16.13■□□□□ 0.17
CTSB-202ENST00000353047 C1orf198Q9H425 327 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms