RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 D6RAR5 112 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 I3L521 148 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 ERCC1P07992 297 aaPredicted RBP19.26■□□□□ 0.67
SHMT1-202ENST00000352886 FKBP2P26885 142 aaKnown RBP19.26■□□□□ 0.67
SHMT1-202ENST00000352886 CX3CR1P49238 355 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 SLC22A6Q4U2R8 563 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 TMEM81Q6P7N7 255 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 TMUB2Q71RG4 321 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 ZNF101Q8IZC7 436 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 FAM71F1Q96KD3 344 aaPredicted RBP19.26■□□□□ 0.67
SHMT1-202ENST00000352886 ARL6Q9H0F7 186 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 AP2S1P53680 142 aaPredicted RBP19.26■□□□□ 0.67
SHMT1-202ENST00000352886 SORDQ00796 357 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 GFOD2Q3B7J2 385 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 MARVELD3Q96A59 401 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 MYOZ1Q9NP98 299 aaPredicted RBP19.26■□□□□ 0.67
SHMT1-202ENST00000352886 KCNN3Q9UGI6 736 aa19.26■□□□□ 0.67
SHMT1-202ENST00000352886 LOC100509620A0A075B734 347 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 TEX51A0A1B0GUA7 166 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 LOC102725191A0A1B0GVB3 256 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 OR14I1A6ND48 311 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 PDGFAP04085 211 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 RRASP10301 218 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 COX6A1P12074 109 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 CCL4P13236 92 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 GMFBP60983 142 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 CXADRP78310 365 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 DHRS2Q13268 280 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 KCNMB1Q16558 191 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 LY6G6FQ5SQ64 297 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 OPN5Q6U736 354 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 RTN4RL2Q86UN3 420 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 GTPBP8Q8N3Z3 284 aaPredicted RBP19.25■□□□□ 0.67
SHMT1-202ENST00000352886 IMMP1LQ96LU5 166 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 GNRHR2Q96P88 292 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 PRRT1Q99946 306 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 SELENOIQ9C0D9 397 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 TMEM14DPA8MWL7 114 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 TLX3O43711 291 aaPredicted RBP19.25■□□□□ 0.67
SHMT1-202ENST00000352886 RP2O75695 350 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 CCL3P10147 92 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 HOXA6P31267 233 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 FAM57BQ71RH2 274 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 UBALD2Q8IYN6 164 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 OR5AS1Q8N127 324 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 ZNF283Q8N7M2 679 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 STEAP2Q8NFT2 490 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 NICN1Q9BSH3 213 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 VSIG4Q9Y279 399 aa19.25■□□□□ 0.67
SHMT1-202ENST00000352886 PATE3B3GLJ2 98 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 SMAD9O15198 467 aaKnown RBP19.24■□□□□ 0.67
SHMT1-202ENST00000352886 KLF7O75840 302 aaPredicted RBP19.24■□□□□ 0.67
SHMT1-202ENST00000352886 LIPCP11150 499 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 OR10R2Q8NGX6 335 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 ASB13Q8WXK3 278 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 IFT46Q9NQC8 304 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 SLC2A8Q9NY64 477 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 HS3ST3B1Q9Y662 390 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 G3V3Y1 287 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 SCGNO76038 276 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 HLA-AP01891 365 aaKnown RBP19.24■□□□□ 0.67
SHMT1-202ENST00000352886 ZNF17P17021 662 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 POU3F2P20265 443 aaPredicted RBP19.24■□□□□ 0.67
SHMT1-202ENST00000352886 M6PRP20645 277 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 RIPPLY1Q0D2K3 151 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 EXT1Q16394 746 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 SGCAQ16586 387 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 GLIPR1L1Q6UWM5 242 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 AGBL5Q8NDL9 886 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 ZNF416Q9BWM5 594 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 ZNF700Q9H0M5 742 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 FBLN5Q9UBX5 448 aa19.24■□□□□ 0.67
SHMT1-202ENST00000352886 A0A087WZY1 265 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 YKT6O15498 198 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 PPP3CBP16298 524 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 H3F3AP84243 136 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 AANATQ16613 207 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 CLVS2Q5SYC1 327 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 RAET1LQ5VY80 246 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 PGAP1Q75T13 922 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 CDX2Q99626 313 aaPredicted RBP19.23■□□□□ 0.67
SHMT1-202ENST00000352886 IER2Q9BTL4 223 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 ZNF230Q9UIE0 474 aaPredicted RBP19.23■□□□□ 0.67
SHMT1-202ENST00000352886 KIF25Q9UIL4 384 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 MRPS28Q9Y2Q9 187 aaKnown RBP19.23■□□□□ 0.67
SHMT1-202ENST00000352886 SPEF1Q9Y4P9 236 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 SDK2Q58EX2 2172 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 IGHV3-15A0A0B4J1V0 119 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 TUBAL3A6NHL2 446 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 CDK2AP1O14519 115 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 SHOXO15266 292 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 HRH1P35367 487 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 OR3A4PP47883 348 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 WDR5BQ86VZ2 330 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 TMEM104Q8NE00 496 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 MRGPRFQ96AM1 343 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 JSRP1Q96MG2 331 aaPredicted RBP19.23■□□□□ 0.67
SHMT1-202ENST00000352886 KCNK7Q9Y2U2 307 aa19.23■□□□□ 0.67
SHMT1-202ENST00000352886 C9J4A7 227 aa19.22■□□□□ 0.67
SHMT1-202ENST00000352886 HCKP08631 526 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms