RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FOLR1P15328 257 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 CD27P26842 260 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 PSMB6P28072 239 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 OR1D5P58170 312 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 PTCRAQ6ISU1 281 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-202ENST00000352393 D2HGDHQ8N465 521 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 OR5D14Q8NGL3 314 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 NARS2Q96I59 477 aaKnown RBP21.78■■□□□ 1.08
CPNE1-202ENST00000352393 NICN1Q9BSH3 213 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 DUSP15Q9H1R2 295 aaPredicted RBP21.78■■□□□ 1.08
CPNE1-202ENST00000352393 FANCFQ9NPI8 374 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 PCDHB16Q9NRJ7 776 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 ASF1BQ9NVP2 202 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 SUSD2Q9UGT4 822 aa21.78■■□□□ 1.08
CPNE1-202ENST00000352393 ZNF208O43345 1280 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 PMP2P02689 132 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 SERPINF1P36955 418 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 ARHGDIBP52566 201 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 SUMO3P55854 103 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-202ENST00000352393 CFHR1Q03591 330 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 CARFQ8N187 725 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 OR4K17Q8NGC6 315 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 MARCH1Q8TCQ1 289 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 C5orf34Q96MH7 638 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 LPAR5Q9H1C0 372 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 ADAMTS20P59510 1910 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 A0A0A6YYD4 124 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 TEX13DA0A0J9YY54 714 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-202ENST00000352393 ZNF354AO60765 605 aaPredicted RBP21.77■■□□□ 1.08
CPNE1-202ENST00000352393 ATG12O94817 140 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 BIDP55957 195 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 FBXW4P57775 412 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 FOXF1Q12946 379 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 ANGPTL5Q86XS5 388 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 OR5T2Q8NGG2 359 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 OR2I1PQ8NGU4 316 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 NMES1Q9C002 83 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 ALKBH4Q9NXW9 302 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 PURGQ9UJV8 347 aaKnown RBP21.77■■□□□ 1.08
CPNE1-202ENST00000352393 CSAG2Q9Y5P2 127 aa21.77■■□□□ 1.08
CPNE1-202ENST00000352393 A0A1W2PNV4 684 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 LIPT2A6NK58 231 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 PGAM2P15259 253 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 NAT1P18440 290 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 ZNF93P35789 620 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-202ENST00000352393 EMP2P54851 167 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 C17orf67Q0P5P2 114 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 UNQ6126/PRO20091Q6UXV3 157 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 RNF144BQ7Z419 303 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 PLPP5Q8NEB5 264 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 OR4K15Q8NH41 348 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 DDIT4LQ96D03 193 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 EMC6Q9BV81 110 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 PISDQ9UG56 409 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 IGHV1OR21-1A0A087WYE8 117 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 IGHV3-20A0A0C4DH32 117 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 C5orf51A6NDU8 294 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 C2CD4DB7Z1M9 353 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 GLULP15104 373 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 CX3CR1P49238 355 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 FOXK1P85037 733 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 SYT13Q7L8C5 426 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 C1orf147Q96MC9 270 aaPredicted RBP21.76■■□□□ 1.07
CPNE1-202ENST00000352393 SERINC1Q9NRX5 453 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 B3GAT1Q9P2W7 334 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 VDAC3Q9Y277 283 aa21.76■■□□□ 1.07
CPNE1-202ENST00000352393 KCNAB3O43448 404 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 CHRM2P08172 466 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 PNLIPRP3Q17RR3 467 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 MICBQ29980 383 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 COX15Q7KZN9 410 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 OR5AS1Q8N127 324 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 BOLLQ8N9W6 283 aaKnown RBP21.75■■□□□ 1.07
CPNE1-202ENST00000352393 SLC30A7Q8NEW0 376 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 DCUN1D4Q92564 292 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 MRPL13Q9BYD1 178 aaKnown RBP21.75■■□□□ 1.07
CPNE1-202ENST00000352393 MOB1AQ9H8S9 216 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 B3GALT5Q9Y2C3 310 aa21.75■■□□□ 1.07
CPNE1-202ENST00000352393 TMEM218A2RU14 115 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 CEACAM18A8MTB9 384 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 GSTP1P09211 210 aaKnown RBP21.74■■□□□ 1.07
CPNE1-202ENST00000352393 FOSL2P15408 326 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 ZNF20P17024 532 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 LAP3P28838 519 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 FOXL2P58012 376 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 VAX1Q5SQQ9 334 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 SHISA6Q6ZSJ9 500 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 SMRP1Q8NCR6 262 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 OR10Z1Q8NGY1 313 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 OR51E1Q8TCB6 317 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 ELP5Q8TE02 316 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 RNF126Q9BV68 326 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 TMEM100Q9NV29 134 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 LHFPL6Q9Y693 200 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 BRWD1Q9NSI6 2320 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 TPT1P13693 172 aaKnown RBP21.74■■□□□ 1.07
CPNE1-202ENST00000352393 NAAAQ02083 359 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 CCDC157Q569K6 752 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 PLAC9Q5JTB6 97 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 ZNF101Q8IZC7 436 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms