RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CALCRP30988 508 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 TMEM244Q5VVB8 128 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 OR51E1Q8TCB6 317 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 SGK3Q96BR1 496 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 NAA50Q9GZZ1 169 aaKnown RBP23.38■■□□□ 1.33
SSBP4-202ENST00000348495 OR51E2Q9H255 320 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 SLC24A3Q9HC58 644 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 STUB1Q9UNE7 303 aa23.38■■□□□ 1.33
SSBP4-202ENST00000348495 TUBAL3A6NHL2 446 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 A6NHS1 94 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 TBX1O43435 398 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 GPX5O75715 221 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 EPXP11678 715 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 ACHEP22303 614 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 CCL1P22362 96 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 CD40P25942 277 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 FABP5Q01469 135 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 TMEM91Q6ZNR0 172 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 RFPL4BQ6ZWI9 263 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 ABHD4Q8TB40 342 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 LYZL4Q96KX0 146 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 GPR84Q9NQS5 396 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 BATF3Q9NR55 127 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 ENPP5Q9UJA9 477 aa23.37■■□□□ 1.33
SSBP4-202ENST00000348495 TRBV5-5A0A0J9YX44 114 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 LOC107986453A0A1B0GWG9 222 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 SMPD2O60906 423 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 HLA-DPB1P04440 258 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 GLYATL3Q5SZD4 288 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 CLVS1Q8IUQ0 354 aaPredicted RBP23.36■■□□□ 1.33
SSBP4-202ENST00000348495 PLPP7Q8NBV4 271 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 OR51A4Q8NGJ6 313 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 TRMT61AQ96FX7 289 aaKnown RBP23.36■■□□□ 1.33
SSBP4-202ENST00000348495 NGBQ9NPG2 151 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 EIF3KQ9UBQ5 218 aaKnown RBP23.36■■□□□ 1.33
SSBP4-202ENST00000348495 STARD10Q9Y365 291 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 ANKHD1Q8IWZ3 2542 aaKnown RBP23.36■■□□□ 1.33
SSBP4-202ENST00000348495 SMIM31A0A1B0GVY4 71 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 TRDV1A0A1B0GX56 115 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 DPRXA6NFQ7 191 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 GALP22466 123 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 INSL4Q14641 139 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 TMEM108Q6UXF1 575 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 Q6ZSR3 168 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 GPR148Q8TDV2 347 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 RPL3LQ92901 407 aaKnown RBP23.36■■□□□ 1.33
SSBP4-202ENST00000348495 SPSB4Q96A44 273 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 DACH2Q96NX9 599 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 RGCCQ9H4X1 137 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 HHLA2Q9UM44 414 aa23.36■■□□□ 1.33
SSBP4-202ENST00000348495 GABARAPO95166 117 aa23.35■■□□□ 1.33
SSBP4-202ENST00000348495 PTAFRP25105 342 aa23.35■■□□□ 1.33
SSBP4-202ENST00000348495 UCP2P55851 309 aa23.35■■□□□ 1.33
SSBP4-202ENST00000348495 OR2AE1Q8NHA4 323 aa23.35■■□□□ 1.33
SSBP4-202ENST00000348495 SOX7Q9BT81 388 aa23.35■■□□□ 1.33
SSBP4-202ENST00000348495 ZNF391Q9UJN7 358 aa23.35■■□□□ 1.33
SSBP4-202ENST00000348495 XRCC2O43543 280 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 RGS9O75916 674 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-202ENST00000348495 CRYAAP02489 173 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 IGFBP2P18065 325 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 TIMM50Q3ZCQ8 353 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 UNQ9370/PRO34162Q6UXP9 181 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 REEP6Q96HR9 211 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 KCNS3Q9BQ31 491 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 POFUT1Q9H488 388 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 NDUFA13Q9P0J0 144 aa23.34■■□□□ 1.33
SSBP4-202ENST00000348495 CLEC18AA5D8T8 446 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 C19orf84I3L1E1 186 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 GABRPO00591 440 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 AIREO43918 545 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 SERPINA3P01011 423 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 FAM157BP0CG42 384 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 PEX19P40855 299 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 TMBIM6P55061 237 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 ZNF92Q03936 586 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 CTF1Q16619 201 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 GFOD2Q3B7J2 385 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 Q499Y3 187 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 ACSM3Q53FZ2 586 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 CLEC18BQ6UXF7 455 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 CLEC18CQ8NCF0 446 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 CHCHD6Q9BRQ6 235 aa23.33■■□□□ 1.33
SSBP4-202ENST00000348495 H3BSH0 61 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 SYT7O43581 403 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 NR4A1P22736 598 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 FGF9P31371 208 aaPredicted RBP23.33■■□□□ 1.32
SSBP4-202ENST00000348495 MAGEB1P43366 347 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 BSPH1Q075Z2 132 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 SPOCK1Q08629 439 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 FOXB2Q5VYV0 432 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 GDPGP1Q6ZNW5 385 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 DOK3Q7L591 496 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 OR5L1Q8NGL2 311 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 ZNF420Q8TAQ5 688 aaPredicted RBP23.33■■□□□ 1.32
SSBP4-202ENST00000348495 OR14A2Q96R54 314 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 OR51B6Q9H340 312 aa23.33■■□□□ 1.32
SSBP4-202ENST00000348495 CADP27708 2225 aa23.32■■□□□ 1.32
SSBP4-202ENST00000348495 A0A1B0GVI7 797 aa23.32■■□□□ 1.32
SSBP4-202ENST00000348495 ZNF879B4DU55 563 aa23.32■■□□□ 1.32
SSBP4-202ENST00000348495 RAD52P43351 418 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms