RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 TNFSF14O43557 240 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 OR10H2O60403 315 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 CTSVO60911 334 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 SRSF10O75494 262 aaKnown RBP13.97□□□□□ -0.17
LRP8-202ENST00000347547 BPNT1O95861 308 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 SKP2Q13309 424 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 UNC119Q13432 240 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 SLC9A3R2Q15599 337 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 TOMM34Q15785 309 aaPredicted RBP13.97□□□□□ -0.17
LRP8-202ENST00000347547 MIDNQ504T8 468 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 SLC35D2Q76EJ3 337 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 OR13C3Q8NGS6 347 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 NKD1Q969G9 470 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 C20orf24Q9BUV8 137 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 BCO1Q9HAY6 547 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 CAPN10Q9HC96 672 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 PHPT1Q9NRX4 125 aaPredicted RBP13.97□□□□□ -0.17
LRP8-202ENST00000347547 ATG2AQ2TAZ0 1938 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 NOTCH4Q99466 2003 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 A0A1B0GW64 132 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 SUCLG1P53597 346 aaKnown RBP13.97□□□□□ -0.17
LRP8-202ENST00000347547 SLC26A5P58743 744 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 BTG2P78543 158 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 MESP2Q0VG99 397 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 TMEM240Q5SV17 173 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 DGAT2L6Q6ZPD8 337 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 MED25Q71SY5 747 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 CACUL1Q86Y37 369 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 CSNK1A1LQ8N752 337 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 RNASE11Q8TAA1 199 aaKnown RBP13.97□□□□□ -0.17
LRP8-202ENST00000347547 FLVCR1-AS1Q8TAF5 88 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 BADQ92934 168 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 GALNT14Q96FL9 552 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 SLC35B3Q9H1N7 401 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 B9D1Q9UPM9 204 aa13.97□□□□□ -0.17
LRP8-202ENST00000347547 OR2C1O95371 312 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 DANCRP0C864 163 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 PAX1P15863 534 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 ZNF708P17019 499 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 RPL12P30050 165 aaKnown RBP13.96□□□□□ -0.17
LRP8-202ENST00000347547 PKIAP61925 76 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 RAP1AP62834 184 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 HSD11B2P80365 405 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 EGR4Q05215 589 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 CDPF1Q6NVV7 123 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 SLC22A18Q96BI1 424 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 TMEM106CQ9BVX2 250 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 CNTNAP3Q9BZ76 1288 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 METTL8Q9H825 291 aaKnown RBP13.96□□□□□ -0.17
LRP8-202ENST00000347547 UBQLN4Q9NRR5 601 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 FBXL17Q9UF56 701 aa13.96□□□□□ -0.17
LRP8-202ENST00000347547 CEACAM5P06731 702 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 SEC11BP0C7V7 166 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 EN2P19622 333 aaPredicted RBP13.96□□□□□ -0.18
LRP8-202ENST00000347547 HSD11B1P28845 292 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 SPCS3P61009 180 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 SPEM2Q0P670 501 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 NPSR1Q6W5P4 371 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 Q7L0L9 218 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 DMRTC2Q8IXT2 367 aaPredicted RBP13.96□□□□□ -0.18
LRP8-202ENST00000347547 TMEFF1Q8IYR6 380 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 C19orf47Q8N9M1 422 aaKnown RBP13.96□□□□□ -0.18
LRP8-202ENST00000347547 AKR7LQ8NHP1 331 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 RHOVQ96L33 236 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 RTBDNQ9BSG5 229 aaPredicted RBP13.96□□□□□ -0.18
LRP8-202ENST00000347547 CNTD2Q9H8S5 307 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 DOK5Q9P104 306 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 MRPS2Q9Y399 296 aaKnown RBP13.96□□□□□ -0.18
LRP8-202ENST00000347547 INSL6Q9Y581 213 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 R4GMQ9 66 aa13.96□□□□□ -0.18
LRP8-202ENST00000347547 LOC107986453A0A1B0GWG9 222 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 FIGNL2A6NMB9 653 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 K7EPK0 472 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 F10P00742 488 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 RPS2P15880 293 aaKnown RBP13.95□□□□□ -0.18
LRP8-202ENST00000347547 GNB3P16520 340 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 S100A10P60903 97 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.95□□□□□ -0.18
LRP8-202ENST00000347547 SHISA5Q8N114 240 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 FAM71E2Q8N5Q1 922 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 RHBDD1Q8TEB9 315 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 MUCL1Q96DR8 90 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 GNRHR2Q96P88 292 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 C2orf88Q9BSF0 95 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 TWSG1Q9GZX9 223 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 SMDT1Q9H4I9 107 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 KCNJ16Q9NPI9 418 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 MRPL22Q9NWU5 206 aaKnown RBP13.95□□□□□ -0.18
LRP8-202ENST00000347547 LUZP4Q9P127 313 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 SLC17A4Q9Y2C5 497 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 AMDHD2Q9Y303 409 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 LRP12Q9Y561 859 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 K7EQS6 105 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 TERTO14746 1132 aaKnown RBP13.95□□□□□ -0.18
LRP8-202ENST00000347547 C5AR1P21730 350 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 DDTP30046 118 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 FCGR2CP31995 323 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 IGFALSP35858 605 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 CLINT1Q14677 625 aa13.95□□□□□ -0.18
LRP8-202ENST00000347547 TCEAL5Q5H9L2 206 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms