RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 CCRL2O00421 344 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 ICMTO60725 284 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 SMPD2O60906 423 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 IGLV3-1P01715 115 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 CD36P16671 472 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 LOXP28300 417 aaPredicted RBP16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 GPR50Q13585 617 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 GFOD2Q3B7J2 385 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 ZNF676Q8N7Q3 588 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 OR51A4Q8NGJ6 313 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 OR5AK2Q8NH90 309 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 ABHD4Q8TB40 342 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 OR51E1Q8TCB6 317 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 TRMT61AQ96FX7 289 aaKnown RBP16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 TMED9Q9BVK6 235 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 SLC24A3Q9HC58 644 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 TBCCD1Q9NVR7 557 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 NDUFB11Q9NX14 153 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 PTTG3PQ9NZH4 202 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 DOPEY2Q9Y3R5 2298 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 LMX1BO60663 402 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 CD1AP06126 327 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 GADD45AP24522 165 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 PTAFRP25105 342 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 KIR2DL3P43628 341 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 UCP2P55851 309 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 ZNF92Q03936 586 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 SPATA46Q5T0L3 261 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 NCMAPQ5T1S8 102 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 SSX8Q7RTT4 187 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 GPR141Q7Z602 305 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 DMRTC2Q8IXT2 367 aaPredicted RBP16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 APOBEC3DQ96AK3 386 aaPredicted RBP16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 PLPPR2Q96GM1 343 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 NAA50Q9GZZ1 169 aaKnown RBP16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 OR10A2Q9H208 303 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 OR51E2Q9H255 320 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 GPR84Q9NQS5 396 aa16.38■□□□□ 0.21
CHMP4A-201ENST00000347519 LOC107986453A0A1B0GWG9 222 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 TMEM212A6NML5 194 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 DEFB108AA8MXU0 73 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 ABCD4O14678 606 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 GPRIN2O60269 458 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 NR4A1P22736 598 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 PCSK6P29122 969 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 FABP5Q01469 135 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 MSMPQ1L6U9 139 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 ZNF544Q6NX49 715 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 TMEM108Q6UXF1 575 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 ZNF704Q6ZNC4 412 aaPredicted RBP16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 ACBD4Q8NC06 268 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 OR52H1Q8NGJ2 320 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 EIF3KQ9UBQ5 218 aaKnown RBP16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 ZNF281Q9Y2X9 895 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 PTPN13Q12923 2485 aa16.37■□□□□ 0.21
CHMP4A-201ENST00000347519 A0A0U1RQV5 110 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 GPX5O75715 221 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 CLDN1O95832 211 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 CRYAAP02489 173 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 ISG15P05161 165 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 CRYBB2P43320 205 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 PPP1CBP62140 327 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 NKX6-1P78426 367 aaPredicted RBP16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 HLXQ14774 488 aaPredicted RBP16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 TMEM255AQ5JRV8 349 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 TMEM91Q6ZNR0 172 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 OR1J1Q8NGS3 322 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 RPL3LQ92901 407 aaKnown RBP16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 REEP6Q96HR9 211 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 RADILQ96JH8 1075 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 FAM71F1Q96KD3 344 aaPredicted RBP16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 HS3ST6Q96QI5 342 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 FUNDC2Q9BWH2 189 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 COMMD4Q9H0A8 199 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 SP140LQ9H930 580 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 NGBQ9NPG2 151 aa16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 KLF2Q9Y5W3 355 aaPredicted RBP16.36■□□□□ 0.21
CHMP4A-201ENST00000347519 DPPA5A6NC42 116 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 PRSS44E7EML9 344 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 H3BSA7 217 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 ATE1O95260 518 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 PLAUP00749 431 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 UBCP0CG48 685 aaKnown RBP16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 ACHEP22303 614 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 CCL1P22362 96 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 GABRA5P31644 462 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 TNK1Q13470 666 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 GK2Q14410 553 aaPredicted RBP16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 TMEM244Q5VVB8 128 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 GPR107Q5VW38 600 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 ADAM5Q6NVV9 412 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 MEX3BQ6ZN04 569 aaKnown RBP16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 SLC25A40Q8TBP6 338 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 SPSB4Q96A44 273 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 KCNS3Q9BQ31 491 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 OR2J1Q9GZK6 312 aa16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 ANKHD1Q8IWZ3 2542 aaKnown RBP16.35■□□□□ 0.21
CHMP4A-201ENST00000347519 TRBV5-5A0A0J9YX44 114 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms