RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 GLTPQ9NZD2 209 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ABRACLQ9P1F3 81 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 ABI3Q9P2A4 366 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 OR52A1Q9UKL2 312 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 MRPS18CQ9Y3D5 142 aaKnown RBP8.15□□□□□ -1.11
ATG4A-202ENST00000345734 FREM1Q5H8C1 2179 aa8.15□□□□□ -1.11
ATG4A-202ENST00000345734 TMEM269A0A1B0GVZ9 245 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 IFITM5A6NNB3 132 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 FAM166BA8MTA8 275 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 AIPO00170 330 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 TLX3O43711 291 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 CCNKO75909 580 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 SFTPCP11686 197 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 SCN1BQ07699 218 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 ZFP69Q49AA0 526 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 TMEM123Q8N131 208 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 UBE2J2Q8N2K1 259 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 GALNT16Q8N428 558 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 OR6N1Q8NGY5 312 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 OR10D3Q8NH80 312 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 OR2V1Q8NHB1 315 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 TMEM54Q969K7 222 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF845Q96IR2 970 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 C11orf54Q9H0W9 315 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 C1orf198Q9H425 327 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF703Q9H7S9 590 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 TPSG1Q9NRR2 321 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 ASH2LQ9UBL3 628 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 POLR1DQ9Y2S0 133 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 V9GY05 133 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 PTPRZ1P23471 2315 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 RER1O15258 196 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 PLA2G10O15496 165 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 NKX2-8O15522 239 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 NOS1APO75052 506 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 SLC43A1O75387 559 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 SNAPINO95295 136 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 APOA1P02647 267 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 ADRB1P08588 477 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 PRKAR1AP10644 381 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 PTBP1P26599 531 aaKnown RBP eCLIP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 CD82P27701 267 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 DDOSTP39656 456 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 GATA4P43694 442 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 RIN1Q13671 783 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 TMEM177Q53S58 311 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 DEGS2Q6QHC5 323 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 SETD6Q8TBK2 473 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 ASB5Q8WWX0 329 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 TTTY12Q9BZ98 90 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 SLITRK2Q9H156 845 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 EIF3KQ9UBQ5 218 aaKnown RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 SPATA2Q9UM82 520 aa8.14□□□□□ -1.11
ATG4A-202ENST00000345734 PCDHGA9Q9Y5G4 932 aaKnown RBP8.14□□□□□ -1.11
ATG4A-202ENST00000345734 P2RY10O00398 339 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 LANCL1O43813 399 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 LMX1BO60663 402 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 RAF1P04049 648 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 MAGEA5P43359 124 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 PITPNBP48739 271 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 ASAH1Q13510 395 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 SGCAQ16586 387 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 TOR2AQ5JU69 321 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 AGAP6Q5VW22 663 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 TRIQKQ629K1 86 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 PLXDC2Q6UX71 529 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 FCRLAQ7L513 359 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 GALNTL5Q7Z4T8 443 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 IZUMO1Q8IYV9 350 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 OR2AJ1Q8NGZ0 328 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 OR6F1Q8NGZ6 308 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 AGAP4Q96P64 663 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 ABHD1Q96SE0 405 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 NKX3-1Q99801 234 aaPredicted RBP8.13□□□□□ -1.11
ATG4A-202ENST00000345734 GAL3ST1Q99999 423 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 LRFN3Q9BTN0 628 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF416Q9BWM5 594 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 PNRC2Q9NPJ4 139 aaKnown RBP8.13□□□□□ -1.11
ATG4A-202ENST00000345734 FAM206AQ9NX38 181 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 DHDHQ9UQ10 334 aa8.13□□□□□ -1.11
ATG4A-202ENST00000345734 LOC107986453A0A1B0GWG9 222 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF98A6NK75 572 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ZNF716A6NP11 495 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 DNPH1O43598 174 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 GATCO43716 136 aaKnown RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 HPNP05981 417 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 YES1P07947 543 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 WT1P19544 449 aaPredicted RBP8.12□□□□□ -1.11
ATG4A-202ENST00000345734 ANOS1P23352 680 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 FPR2P25090 351 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 NBL1P41271 181 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 HTR2BP41595 481 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 SRYQ05066 204 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 KCNMB1Q16558 191 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 CARTPTQ16568 116 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 FAM209BQ5JX69 171 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 C10orf128Q5T292 105 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 BCL2L15Q5TBC7 163 aa8.12□□□□□ -1.11
ATG4A-202ENST00000345734 CMTM4Q8IZR5 234 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms