RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 METTL17Q9H7H0 456 aaPredicted RBP12.14□□□□□ -0.47
HMGN3-202ENST00000344726 MARCH7Q9H992 704 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 CENPMQ9NSP4 180 aa12.14□□□□□ -0.47
HMGN3-202ENST00000344726 LOC105371242A0A075B767 164 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 ZNF878C9JN71 531 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 SURF4O15260 269 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 GLCEO94923 617 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 PNPP00491 289 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 ANXA8P13928 327 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 ANPEPP15144 967 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 PCMT1P22061 227 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 ZFP36P26651 326 aaKnown RBP12.13□□□□□ -0.47
HMGN3-202ENST00000344726 PMELP40967 661 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
HMGN3-202ENST00000344726 BTG1P62324 171 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 MALLQ13021 153 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 MAB21L1Q13394 359 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 TMEM236Q5W0B7 351 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 PLBD1Q6P4A8 553 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 SHQ1Q6PI26 577 aaKnown RBP12.13□□□□□ -0.47
HMGN3-202ENST00000344726 DRAM2Q6UX65 266 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 PGAP1Q75T13 922 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 PEG10Q86TG7 708 aaKnown RBP12.13□□□□□ -0.47
HMGN3-202ENST00000344726 LRRC28Q86X40 367 aaPredicted RBP12.13□□□□□ -0.47
HMGN3-202ENST00000344726 TIGD4Q8IY51 512 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 RFLNBQ8N5W9 214 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 OR6N2Q8NGY6 317 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 ZMYND19Q96E35 227 aaPredicted RBP12.13□□□□□ -0.47
HMGN3-202ENST00000344726 INTS14Q96SY0 518 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 KCNJ15Q99712 375 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 OR51V1Q9H2C8 321 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 YY1AP1Q9H869 796 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 TMEM100Q9NV29 134 aa12.13□□□□□ -0.47
HMGN3-202ENST00000344726 CD300LBA8K4G0 201 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 TCF21O43680 179 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 ZNF205O95201 554 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 VENTXO95231 258 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 CYB5R3P00387 301 aaPredicted RBP12.12□□□□□ -0.47
HMGN3-202ENST00000344726 GSTT1P30711 240 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 BLVRAP53004 296 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 LCN2P80188 198 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 EIF2B1Q14232 305 aaKnown RBP12.12□□□□□ -0.47
HMGN3-202ENST00000344726 MRPL21Q7Z2W9 205 aaKnown RBP12.12□□□□□ -0.47
HMGN3-202ENST00000344726 MOGAT3Q86VF5 341 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 BBS1Q8NFJ9 593 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 SEMA6DQ8NFY4 1073 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 ABHD6Q9BV23 337 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 ZNF556Q9HAH1 456 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 PATZ1Q9HBE1 687 aaKnown RBP12.12□□□□□ -0.47
HMGN3-202ENST00000344726 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
HMGN3-202ENST00000344726 PRR23D1E9PI22 279 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-202ENST00000344726 F5H0A9 414 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-202ENST00000344726 SELENOFO60613 162 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 RGS9O75916 674 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-202ENST00000344726 PRR23D2P0DMB1 279 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-202ENST00000344726 ADRA2CP18825 462 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 CA6P23280 308 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 SRP9P49458 86 aaKnown RBP12.11□□□□□ -0.47
HMGN3-202ENST00000344726 DAPP51397 102 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 HOXA4Q00056 320 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-202ENST00000344726 TAF13Q15543 124 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 TMEM155Q4W5P6 130 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 FAM201AQ5SY85 155 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 FAHD1Q6P587 224 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 PRSS45Q7RTY3 260 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 CPOQ8IVL8 374 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 RNF133Q8WVZ7 376 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 SPRYD4Q8WW59 207 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-202ENST00000344726 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
HMGN3-202ENST00000344726 NRBF2Q96F24 287 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 OPN4Q9UHM6 478 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 N6AMT1Q9Y5N5 214 aa12.11□□□□□ -0.47
HMGN3-202ENST00000344726 HMGN1P05114 100 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 PAICSP22234 425 aaKnown RBP12.1□□□□□ -0.47
HMGN3-202ENST00000344726 SLC2A5P22732 501 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 MDH2P40926 338 aaKnown RBP12.1□□□□□ -0.47
HMGN3-202ENST00000344726 OPRL1P41146 370 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 CD200P41217 278 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 GATA4P43694 442 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 CX3CR1P49238 355 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 RAD23AP54725 363 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 GRB2P62993 217 aaKnown RBP12.1□□□□□ -0.47
HMGN3-202ENST00000344726 MPPED2Q15777 294 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 PRAMEF6Q5VXH4 476 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 SPICQ8N5J4 248 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.1□□□□□ -0.47
HMGN3-202ENST00000344726 SPSB4Q96A44 273 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 TMEM165Q9HC07 324 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 MMP26Q9NRE1 261 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 ZNF319Q9P2F9 582 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 KLHDC2Q9Y2U9 406 aa12.1□□□□□ -0.47
HMGN3-202ENST00000344726 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 A0A0G2JMP0 313 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 A0A0X1KG70 313 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 GGT3PA6NGU5 568 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 CEACAM18A8MTB9 384 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 TRAPPC2LH3BP13 241 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 IFNL4K9M1U5 179 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 PRODHO43272 600 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms