RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 YPEL5P62699 121 aa16.37■□□□□ 0.21
SMC4-201ENST00000344722 OR10J5Q8NHC4 309 aa16.37■□□□□ 0.21
SMC4-201ENST00000344722 ZNF845Q96IR2 970 aaPredicted RBP16.37■□□□□ 0.21
SMC4-201ENST00000344722 C1QTNF6Q9BXI9 259 aa16.37■□□□□ 0.21
SMC4-201ENST00000344722 PBOV1Q9GZY1 135 aa16.37■□□□□ 0.21
SMC4-201ENST00000344722 POU3F2P20265 443 aaPredicted RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 RBP2P50120 134 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 HSF1Q00613 529 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 PCK2Q16822 640 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 FAHD2BQ6P2I3 314 aaPredicted RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 FAHD2AQ96GK7 314 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 LYRM2Q9NU23 88 aaPredicted RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 SCN7AQ01118 1682 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 TCAPO15273 167 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 EIF1BO60739 113 aaKnown RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 CD22P20273 847 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 APOBEC1P41238 236 aaKnown RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 C9orf152Q5JTZ5 239 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 KCNJ15Q99712 375 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 GDE1Q9NZC3 331 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 MCTS1Q9ULC4 181 aaKnown RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 WSB1Q9Y6I7 421 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 IGFBP6P24592 240 aaPredicted RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 RPS27P42677 84 aaKnown RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 SLC25A1P53007 311 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 DMKNQ6E0U4 476 aaPredicted RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 ZNF66Q6ZN08 573 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 FAM210BQ96KR6 192 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 TXNIPQ9H3M7 391 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 ZDHHC11Q9H8X9 412 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 CCL26Q9Y258 94 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 SERPINE3A8MV23 424 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 EMDP50402 254 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 HTRA3P83110 453 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 AWAT1Q58HT5 328 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 NCMAPQ5T1S8 102 aa16.36■□□□□ 0.21
SMC4-201ENST00000344722 ZNF275Q9NSD4 429 aaPredicted RBP16.36■□□□□ 0.21
SMC4-201ENST00000344722 FIGNL2A6NMB9 653 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 ZNF217O75362 1048 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 GCH1P30793 250 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 HABP2Q14520 560 aaPredicted RBP16.35■□□□□ 0.21
SMC4-201ENST00000344722 FBLIM1Q8WUP2 373 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 OR8B4Q96RC9 309 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 CHST11Q9NPF2 352 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 M0R143 59 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 TOX4O94842 621 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 ZFPL1O95159 310 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 IGF2P01344 180 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 IGHA1P01876 353 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 SEMG1P04279 462 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 GLI4P10075 376 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 NAT2P11245 290 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 EIF1P41567 113 aaKnown RBP16.35■□□□□ 0.21
SMC4-201ENST00000344722 HIST1H3AP68431 136 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 FAM162BQ5T6X4 162 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 LINC00518Q8N0U6 118 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 OR51H1Q8NH63 302 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 CCDC74AQ96AQ1 378 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 PPP1R3EQ9H7J1 279 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 LRIT1Q9P2V4 623 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 CD96P40200 585 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 ASTLQ6HA08 431 aaPredicted RBP16.35■□□□□ 0.21
SMC4-201ENST00000344722 KCNE3Q9Y6H6 103 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 GSK3AP49840 483 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 LIPHQ8WWY8 451 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 LINC00615Q96LM1 132 aaPredicted RBP16.35■□□□□ 0.21
SMC4-201ENST00000344722 GPR84Q9NQS5 396 aa16.35■□□□□ 0.21
SMC4-201ENST00000344722 TOGARAM1Q9Y4F4 1720 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 HNRNPA3P51991 378 aaKnown RBP16.34■□□□□ 0.21
SMC4-201ENST00000344722 OR4C5Q8NGB2 326 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 LILRB1Q8NHL6 650 aaPredicted RBP16.34■□□□□ 0.21
SMC4-201ENST00000344722 OTOSQ8NHW6 89 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 GPR173Q9NS66 373 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.34■□□□□ 0.214e-9■■■■■ 118.1
SMC4-201ENST00000344722 PRTGQ2VWP7 1150 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 AAED1Q7RTV5 226 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 B9D1Q9UPM9 204 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 COX5AP20674 150 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 RAB32Q13637 225 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 THEM4Q5T1C6 240 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 ABHD5Q8WTS1 349 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 KLF15Q9UIH9 416 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 ZNF816-ZNF321PA0A0X1KG74 233 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 ZNF321PQ8N8H1 164 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 IL23AQ9NPF7 189 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 HEYLQ9NQ87 328 aaPredicted RBP16.34■□□□□ 0.21
SMC4-201ENST00000344722 LPAR3Q9UBY5 353 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 CA14Q9ULX7 337 aa16.34■□□□□ 0.21
SMC4-201ENST00000344722 hCG_1809904A0A1W2PP81 198 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 A0A1W2PR64 198 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 A0A1W2PRV1 198 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 XKRY2A2RUG3 117 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 CLN5O75503 358 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 TOMM20LQ6UXN7 152 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 ADIPOR2Q86V24 386 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 NMES1Q9C002 83 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 GPR160Q9UJ42 338 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 PIAS3Q9Y6X2 628 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 NTF3P20783 257 aa16.33■□□□□ 0.21
SMC4-201ENST00000344722 BTG2P78543 158 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms