RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 OR5AS1Q8N127 324 aa18.93■□□□□ 0.62
CCDC38-201ENST00000344280 GNRHR2Q96P88 292 aa18.93■□□□□ 0.62
CCDC38-201ENST00000344280 KCNN3Q9UGI6 736 aa18.93■□□□□ 0.62
CCDC38-201ENST00000344280 A0A0A6YYD4 124 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 IGHV3-15A0A0B4J1V0 119 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 CFIP05156 583 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 FGF5P12034 268 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 CCL4P13236 92 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 ZNF20P17024 532 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 CLDN17P56750 224 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 STEAP2Q8NFT2 490 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 KCNK7Q9Y2U2 307 aa18.92■□□□□ 0.62
CCDC38-201ENST00000344280 A0A1W2PP11 408 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 ZNF726A6NNF4 738 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 PATE3B3GLJ2 98 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 CCL3P10147 92 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 OR3A4PP47883 348 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 RNASE10Q5GAN6 216 aaKnown RBP18.91■□□□□ 0.62
CCDC38-201ENST00000344280 NAA40Q86UY6 237 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 ZNF101Q8IZC7 436 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 MARVELD3Q96A59 401 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 ZNF107Q9UII5 783 aaPredicted RBP18.91■□□□□ 0.62
CCDC38-201ENST00000344280 TMEM265A0A087WTH1 108 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 IGHV1-45A0A0A0MS14 117 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 TMEM14DPA8MWL7 114 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 SSX5O60225 188 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 RP2O75695 350 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 HRH1P35367 487 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 CX3CR1P49238 355 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 PHYHD1Q5SRE7 291 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 TMPPEQ6ZT21 453 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 FAM57BQ71RH2 274 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 NAT6Q93015 286 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 CCDC120Q96HB5 630 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 CXorf58Q96LI9 332 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 C1orf147Q96MC9 270 aaPredicted RBP18.91■□□□□ 0.62
CCDC38-201ENST00000344280 HDGFL3Q9Y3E1 203 aa18.91■□□□□ 0.62
CCDC38-201ENST00000344280 ZSCAN5BA6NJL1 495 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 CCSO14618 274 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 PDGFBP01127 241 aaPredicted RBP18.9■□□□□ 0.62
CCDC38-201ENST00000344280 HLA-AP01891 365 aaKnown RBP18.9■□□□□ 0.62
CCDC38-201ENST00000344280 CD96P40200 585 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 GLIPR1L1Q6UWM5 242 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 SLC25A43Q8WUT9 341 aaPredicted RBP18.9■□□□□ 0.62
CCDC38-201ENST00000344280 ZNF416Q9BWM5 594 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 PROK2Q9HC23 129 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 PTRH2Q9Y3E5 179 aaKnown RBP18.9■□□□□ 0.62
CCDC38-201ENST00000344280 LOC102723996A0A087X1L8 192 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 TP53I11O14683 189 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 KLF7O75840 302 aaPredicted RBP18.9■□□□□ 0.62
CCDC38-201ENST00000344280 ADH6P28332 368 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 EIF1P41567 113 aaKnown RBP18.9■□□□□ 0.62
CCDC38-201ENST00000344280 LIN54Q6MZP7 749 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 DTX1Q86Y01 620 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 OR10R2Q8NGX6 335 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 COQ8AQ8NI60 647 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 DMRTA2Q96SC8 542 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 CST11Q9H112 138 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 LPAR5Q9H1C0 372 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 BANF2Q9H503 90 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 RDH8Q9NYR8 311 aa18.9■□□□□ 0.62
CCDC38-201ENST00000344280 DISC1C4P0D8 188 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 NMBP08949 121 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 COX6A1P12074 109 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 CAPZA1P52907 286 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 SGCAQ16586 387 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 ZNF283Q8N7M2 679 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 MR1Q95460 341 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 IMMP1LQ96LU5 166 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 ZNF385AQ96PM9 386 aaKnown RBP18.89■□□□□ 0.61
CCDC38-201ENST00000344280 UCN2Q96RP3 112 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 MOB1AQ9H8S9 216 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 WDR54Q9H977 334 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 FN3KRPQ9HA64 309 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 MYOZ1Q9NP98 299 aaPredicted RBP18.89■□□□□ 0.61
CCDC38-201ENST00000344280 KIF25Q9UIL4 384 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 TNRC6BQ9UPQ9 1833 aaKnown RBP18.89■□□□□ 0.61
CCDC38-201ENST00000344280 OR2AT4A6NND4 320 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 H3F3AP84243 136 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 PPP1R1AQ13522 171 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 MEF2DQ14814 521 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 ZNF239Q16600 458 aaKnown RBP18.89■□□□□ 0.61
CCDC38-201ENST00000344280 PLAC9Q5JTB6 97 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 SIGIRRQ6IA17 410 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 GSG1LQ6UXU4 331 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 MFFQ9GZY8 342 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 PRDM6Q9NQX0 595 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 SLC2A8Q9NY64 477 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 ZNF224Q9NZL3 707 aa18.89■□□□□ 0.61
CCDC38-201ENST00000344280 MRPS28Q9Y2Q9 187 aaKnown RBP18.89■□□□□ 0.61
CCDC38-201ENST00000344280 NOP16Q9Y3C1 178 aaKnown RBP18.89■□□□□ 0.61
CCDC38-201ENST00000344280 IGKV1-9A0A0C4DH69 117 aa18.88■□□□□ 0.61
CCDC38-201ENST00000344280 RFPL4AA6NLU0 287 aa18.88■□□□□ 0.61
CCDC38-201ENST00000344280 D6RAR5 112 aa18.88■□□□□ 0.61
CCDC38-201ENST00000344280 RFPL4AL1F8VTS6 287 aa18.88■□□□□ 0.61
CCDC38-201ENST00000344280 SOCS1O15524 211 aa18.88■□□□□ 0.61
CCDC38-201ENST00000344280 CD34P28906 385 aa18.88■□□□□ 0.61
CCDC38-201ENST00000344280 SLC35A1P78382 337 aa18.88■□□□□ 0.61
CCDC38-201ENST00000344280 RSPO4Q2I0M5 234 aaPredicted RBP18.88■□□□□ 0.61
CCDC38-201ENST00000344280 GTPBP8Q8N3Z3 284 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms