RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 FAM96BQ9Y3D0 163 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 ZFC3H1O60293 1989 aaKnown RBP7.29□□□□□ -1.24
UBE4B-202ENST00000343090 OR2J2O76002 312 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 PTGFRP43088 359 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.29□□□□□ -1.24
UBE4B-202ENST00000343090 OR4D11Q8NGI4 311 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 OR4C16Q8NGL9 310 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 FBXO17Q96EF6 278 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 MALSU1Q96EH3 234 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 JAM3Q9BX67 310 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 ZFP64Q9NPA5 681 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 SIRT3Q9NTG7 399 aaPredicted RBP7.29□□□□□ -1.24
UBE4B-202ENST00000343090 CDC42EP2O14613 210 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 CXCL2P19875 107 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 HRH1P35367 487 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 OPRM1P35372 400 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 PPP1CAP62136 330 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 GRB2P62993 217 aaKnown RBP7.29□□□□□ -1.24
UBE4B-202ENST00000343090 TCTN1Q2MV58 587 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 EMC4Q5J8M3 183 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 ABHD6Q9BV23 337 aa7.29□□□□□ -1.24
UBE4B-202ENST00000343090 C7orf66A4D0T2 115 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 RNASEK-C17orf49H0YIS7 233 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 HS3ST1O14792 307 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 EFSO43281 561 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 NME2P1O60361 137 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 GPR137BO60478 399 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 EIF3GO75821 320 aaKnown RBP eCLIP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 OR4E1P0C645 316 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 CDAP32320 146 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 FAM109BQ6ICB4 259 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 RGS7BPQ6MZT1 257 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 SEZ6L2Q6UXD5 910 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 THSD4Q6ZMP0 1018 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 RPS19BP1Q86WX3 136 aaKnown RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 SEMA6DQ8NFY4 1073 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 PPP1R3EQ9H7J1 279 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 SERTAD4Q9NUC0 356 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 PCYT1BQ9Y5K3 369 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 SHANK3Q9BYB0 1731 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 A0A1W2PPC4 97 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 PLSCR5A0PG75 271 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 HMSDA8MTL9 139 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 LINC00587B1AMM8 73 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 FFAR1O14842 300 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 LSM11P83369 360 aaKnown RBP eCLIP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 EGR3Q06889 387 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 RNLSQ5VYX0 342 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 DOK3Q7L591 496 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 OR5AS1Q8N127 324 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 C17orf47Q8NEP4 570 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 OR5M9Q8NGP3 310 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 RBMXL1Q96E39 390 aaKnown RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 LRRC61Q9BV99 259 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 GHITMQ9H3K2 345 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 NECAP2Q9NVZ3 263 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 B9D1Q9UPM9 204 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 A0A0B4J2E0 115 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 A0A1B0GX12 115 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 A0A1W2PPV4 95 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 H0YIG0 161 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 RAB27BO00194 218 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 CD46P15529 392 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 GABRG2P18507 467 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 PCBP3P57721 371 aaKnown RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 CST9LP1Q5W188 147 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 Q6ZRG5 221 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 MAML2Q8IZL2 1156 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF383Q8NA42 475 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 PLPP5Q8NEB5 264 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 OR4S1Q8NGB4 309 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 MARCH1Q8TCQ1 289 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 PPP1R1CQ8WVI7 109 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF75AQ96N20 296 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF2Q9BSG1 426 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 TXNIPQ9H3M7 391 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 EXOSC3Q9NQT5 275 aaKnown RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 KCND3Q9UK17 655 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 PADI1Q9ULC6 663 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 A0A0B4J293 547 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF814B7Z6K7 855 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 LILRB5O75023 590 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 CELA2BP08218 269 aaPredicted RBP7.28□□□□□ -1.24
UBE4B-202ENST00000343090 COTL1Q14019 142 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 ZNF626Q68DY1 528 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 SLC22A25Q6T423 547 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 IER2Q9BTL4 223 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 NUDT9Q9BW91 350 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 PBOV1Q9GZY1 135 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 S1PR5Q9H228 398 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 SLC52A3Q9NQ40 469 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 FBXO4Q9UKT5 387 aa7.28□□□□□ -1.24
UBE4B-202ENST00000343090 NDUFB6O95139 128 aa7.27□□□□□ -1.25
UBE4B-202ENST00000343090 CLDN1O95832 211 aa7.27□□□□□ -1.25
UBE4B-202ENST00000343090 CHRM2P08172 466 aa7.27□□□□□ -1.25
UBE4B-202ENST00000343090 PAX6P26367 422 aa7.27□□□□□ -1.25
UBE4B-202ENST00000343090 CHRNB4P30926 498 aa7.27□□□□□ -1.25
UBE4B-202ENST00000343090 HMGA2P52926 109 aa7.27□□□□□ -1.25
UBE4B-202ENST00000343090 RNF4P78317 190 aa7.27□□□□□ -1.25
UBE4B-202ENST00000343090 PLGLAQ15195 96 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms