RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TMPRSS13Q9BYE2 586 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 PBOV1Q9GZY1 135 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 R4GMQ9 66 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 MT-ATP6P00846 226 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 HLA-DOBP13765 273 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 ADRA2CP18825 462 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 CX3CR1P49238 355 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 ATPAF1Q5TC12 328 aaPredicted RBP11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 OR5M9Q8NGP3 310 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 STT3BQ8TCJ2 826 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 SCGB1C1Q8TD33 95 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 C11orf40Q8WZ69 217 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF2Q9BSG1 426 aaPredicted RBP11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 CNTD2Q9H8S5 307 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 GPR173Q9NS66 373 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 PATJQ8NI35 1801 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 PHF1O43189 567 aaPredicted RBP11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 ADAM11O75078 769 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 GABRG2P18507 467 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 AKR1C8PQ5T2L2 129 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 SUMF2Q8NBJ7 301 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 SPTSSAQ969W0 71 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 ZNF845Q96IR2 970 aaPredicted RBP11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 LRFN5Q96NI6 719 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 PIGLQ9Y2B2 252 aa11.16□□□□□ -0.62
SNRNP48-201ENST00000342415 RER1O15258 196 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 SHOXO15266 292 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 GSTZ1O43708 216 aaPredicted RBP11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 ERGP11308 486 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 SPINK2P20155 84 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 GLRA1P23415 457 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 ABCD3P28288 659 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 EMC4Q5J8M3 183 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 C20orf196Q8IYI0 205 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 BHLHE23Q8NDY6 225 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 TCTEX1D2Q8WW35 142 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 AKR1E2Q96JD6 320 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 LAT2Q9GZY6 243 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 SPACA1Q9HBV2 294 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 SCRG1O75711 98 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 IKZF1Q13422 519 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 MOB3CQ70IA8 216 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 HGDQ93099 445 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 SEH1LQ96EE3 360 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 PTRH2Q9Y3E5 179 aaKnown RBP11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 PTPRDP23468 1912 aa11.15□□□□□ -0.62
SNRNP48-201ENST00000342415 FAM74A7A6NL05 159 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 K7EQS6 105 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 FAHP16930 419 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 FCGR2CP31995 323 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 C2orf68Q2NKX9 166 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 FAM74A3Q4VXF1 159 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 LPCAT3Q6P1A2 487 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 PFDN5Q99471 154 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 LUZP4Q9P127 313 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 SCN4AP35499 1836 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 AKAP6Q13023 2319 aa11.15□□□□□ -0.63
SNRNP48-201ENST00000342415 A0A0G2JK05 382 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 SPTY2D1-AS1A0A0U1RR47 76 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 ZFAND5O76080 213 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF44P15621 663 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 LAP3P28838 519 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 CAPZBP47756 277 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF611Q8N823 705 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 TERB2Q8NHR7 220 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 LRRC61Q9BV99 259 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 S1PR5Q9H228 398 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 FAM212BQ9NTI7 297 aaPredicted RBP11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 C1orf123Q9NWV4 160 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 MDC1Q14676 2089 aaKnown RBP11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 IFNA5P01569 189 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 GLAP06280 429 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 CPN1P15169 458 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 CASRP41180 1078 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF121P58317 390 aaPredicted RBP11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 TAS2R46P59540 309 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 FOXF1Q12946 379 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 SOHLH1Q5JUK2 328 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 RNF128Q8TEB7 428 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 ARHGAP5-AS1Q96IT6 56 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 SHDQ96IW2 340 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 CDCA3Q99618 268 aaPredicted RBP11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 EXOSC3Q9NQT5 275 aaKnown RBP11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 TNS1Q9HBL0 1735 aaKnown RBP11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 TSC2P49815 1807 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 FREM3P0C091 2139 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 ESPL1Q14674 2120 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 EIF4E2O60573 245 aaKnown RBP11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 CHRM2P08172 466 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 EDN3P14138 238 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 BTCP35070 178 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 SLC25A1P53007 311 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 GAS1P54826 345 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 TSC22D1Q15714 1073 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 PLCXD3Q63HM9 321 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 EXD3Q8N9H8 876 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 TMEM229BQ8NBD8 167 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 OR52H1Q8NGJ2 320 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 ELSPBP1Q96BH3 223 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms