RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CSAG2Q9Y5P2 127 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 ZNF318Q5VUA4 2279 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 MEX3AA1L020 520 aaKnown RBP11.2□□□□□ -0.62
LMX1A-202ENST00000342310 BCAT2O15382 392 aaPredicted RBP11.2□□□□□ -0.62
LMX1A-202ENST00000342310 LTBRP36941 435 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 MRPS10P82664 201 aaKnown RBP11.2□□□□□ -0.62
LMX1A-202ENST00000342310 ZNF616Q08AN1 781 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 SWI5Q1ZZU3 235 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 CHRFAM7AQ494W8 412 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 TMEM244Q5VVB8 128 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 EID2Q8N6I1 236 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 ZNF721Q8TF20 911 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 PELOQ9BRX2 385 aaKnown RBP11.2□□□□□ -0.62
LMX1A-202ENST00000342310 C1orf198Q9H425 327 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 FAM96BQ9Y3D0 163 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 ETV7Q9Y603 341 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 PIEZO2Q9H5I5 2752 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 IGHV1OR21-1A0A087WYE8 117 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 ZNF850A8MQ14 1090 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 NPIPB9F8W1W9 429 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 PLPP3O14495 311 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 DBHP09172 617 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 FCGR2AP12318 317 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 CD27P26842 260 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 BIVMQ86UB2 503 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 SCARB1Q8WTV0 552 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 TMEM59Q9BXS4 323 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 NMNAT2Q9BZQ4 307 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 PBOV1Q9GZY1 135 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 SMOC1Q9H4F8 434 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 KLK13Q9UKR3 277 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 PCDHGA1Q9Y5H4 931 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 TMEM200CA6NKL6 621 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 D6RAR5 112 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 M0R036 132 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 ZNF121P58317 390 aaPredicted RBP11.19□□□□□ -0.62
LMX1A-202ENST00000342310 FGL1Q08830 312 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 KRBOX4Q5JUW0 171 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 CLVS2Q5SYC1 327 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 GUSBP11Q6P575 273 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 BPIFCQ8NFQ6 507 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 OR1N1Q8NGS0 311 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 OR5H2Q8NGV7 314 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 RNF128Q8TEB7 428 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 FOXRED1Q96CU9 486 aaPredicted RBP11.19□□□□□ -0.62
LMX1A-202ENST00000342310 LANCL2Q9NS86 450 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 GPN3Q9UHW5 284 aaPredicted RBP11.19□□□□□ -0.62
LMX1A-202ENST00000342310 FRG2CA6NGY1 282 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 TXNL1O43396 289 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 SULT1B1O43704 296 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 NME1P15531 152 aaKnown RBP11.19□□□□□ -0.62
LMX1A-202ENST00000342310 EGR3Q06889 387 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 TAF9Q16594 264 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 MEX3BQ6ZN04 569 aaKnown RBP11.19□□□□□ -0.62
LMX1A-202ENST00000342310 SUMF1Q8NBK3 374 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 DDIT4LQ96D03 193 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 SLC19A3Q9BZV2 496 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 RARRES3Q9UL19 164 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
LMX1A-202ENST00000342310 MED13LQ71F56 2210 aa11.19□□□□□ -0.62
LMX1A-202ENST00000342310 NPIPA2E9PIF3 369 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 NPIPA3F8WFD2 350 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 HOXD4P09016 255 aaPredicted RBP11.18□□□□□ -0.62
LMX1A-202ENST00000342310 JMJD7P0C870 316 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 GAAP10253 952 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 GABRA1P14867 456 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 OTX2P32243 289 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.18□□□□□ -0.62
LMX1A-202ENST00000342310 SPIN3Q5JUX0 258 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PTCRAQ6ISU1 281 aaPredicted RBP11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PEG10Q86TG7 708 aaKnown RBP11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PNLDC1Q8NA58 520 aaKnown RBP11.18□□□□□ -0.62
LMX1A-202ENST00000342310 BHLHE23Q8NDY6 225 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 FAM71CQ8NEG0 241 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 DYRK2Q92630 601 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 FAM86C1Q9NVL1 165 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 GDF2Q9UK05 429 aaPredicted RBP11.18□□□□□ -0.62
LMX1A-202ENST00000342310 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PTRH2Q9Y3E5 179 aaKnown RBP11.18□□□□□ -0.62
LMX1A-202ENST00000342310 ABCA1O95477 2261 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 AKAP6Q13023 2319 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PLSCR5A0PG75 271 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PRR19A6NJB7 356 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 BGLAPP02818 100 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 LCATP04180 440 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 GLRA1P23415 457 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 OMGP23515 440 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 SLC25A1P53007 311 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PHLDA2Q53GA4 152 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 TMEM71Q6P5X7 295 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 SPAG16Q8N0X2 631 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 C12orf57Q99622 126 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PLEKHJ1Q9NW61 149 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 LMO7DNF2Z398 122 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 PHYHO14832 338 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 S100A9P06702 114 aaKnown RBP11.18□□□□□ -0.62
LMX1A-202ENST00000342310 EFNA3P52797 238 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 IL10RAQ13651 578 aa11.18□□□□□ -0.62
LMX1A-202ENST00000342310 UNQ9370/PRO34162Q6UXP9 181 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms