RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 A0A0A6YYH2 397 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 WIPF3A6NGB9 483 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 A6NJ64 397 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 M0QYG6 137 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 SYT7O43581 403 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 SIX6O95475 246 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 RAB3DO95716 219 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 ITGB2P05107 769 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 CXCL2P19875 107 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 RAB6AP20340 208 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 ENPP1P22413 925 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 HSD11B1P28845 292 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 GNALP38405 381 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 UBE2MP61081 183 aaKnown RBP13.27□□□□□ -0.28
TPM3-208ENST00000341485 ABHD17BQ5VST6 288 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 MUC20Q8N307 709 aaPredicted RBP13.27□□□□□ -0.28
TPM3-208ENST00000341485 ACBD4Q8NC06 268 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 OR52N4Q8NGI2 321 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 PSMF1Q92530 271 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 TINAGL1Q9GZM7 467 aaPredicted RBP13.27□□□□□ -0.28
TPM3-208ENST00000341485 EXO5Q9H790 373 aa13.27□□□□□ -0.28
TPM3-208ENST00000341485 EP300Q09472 2414 aaPredicted RBP13.27□□□□□ -0.28
TPM3-208ENST00000341485 A0A1B0GTI1 187 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 LIPCP11150 499 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 LIFP15018 202 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 CASRP41180 1078 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 H2BFSP57053 126 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 TMEM176BQ3YBM2 270 aaPredicted RBP13.27□□□□□ -0.29
TPM3-208ENST00000341485 ESCO2Q56NI9 601 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 WDFY3Q8IZQ1 3526 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 OR2AK2Q8NG84 335 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 OR1M1Q8NGA1 313 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 OR6X1Q8NH79 312 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 ZBTB8AQ96BR9 441 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 OXGR1Q96P68 337 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 PROK2Q9HC23 129 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 DKKL1Q9UK85 242 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 KLK13Q9UKR3 277 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 POLR1DQ9Y2S0 133 aa13.27□□□□□ -0.29
TPM3-208ENST00000341485 PTPRBP23467 1997 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 A0A087WZY1 265 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 RPS10-NUDT3A0A1W2PQS6 291 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 TMEM235A6NFC5 223 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 IFNA7P01567 189 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 MELTFP08582 738 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 EIF1P41567 113 aaKnown RBP13.26□□□□□ -0.29
TPM3-208ENST00000341485 P2RX3P56373 397 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 OPCMLQ14982 345 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 POU4F3Q15319 338 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 ZNF239Q16600 458 aaKnown RBP13.26□□□□□ -0.29
TPM3-208ENST00000341485 PAQR4Q8N4S7 273 aaPredicted RBP13.26□□□□□ -0.29
TPM3-208ENST00000341485 SLC25A43Q8WUT9 341 aaPredicted RBP13.26□□□□□ -0.29
TPM3-208ENST00000341485 ELMOD3Q96FG2 381 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 TMEM41AQ96HV5 264 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 GNRHR2Q96P88 292 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 TMPRSS13Q9BYE2 586 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 RAB22AQ9UL26 194 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 AUP1Q9Y679 476 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 MED12Q93074 2177 aa13.26□□□□□ -0.29
TPM3-208ENST00000341485 AQP7P3A6NL99 342 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ZNF878C9JN71 531 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 M0R233 179 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 GOSR2O14653 212 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 F10P00742 488 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 CD74P04233 296 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ZNF735P0CB33 412 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 DSCR4P56555 118 aaPredicted RBP13.25□□□□□ -0.29
TPM3-208ENST00000341485 QRFPP83859 136 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 UNC119Q13432 240 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 C1QTNF12Q5T7M4 302 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ZNF529Q6P280 563 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 IGF2-ASQ6U949 168 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 VASH2Q86V25 355 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 CDH26Q8IXH8 852 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 OR2AJ1Q8NGZ0 328 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 OR51E1Q8TCB6 317 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 AQP3Q92482 292 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 PNPLA2Q96AD5 504 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 SLCO5A1Q9H2Y9 848 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 POFUT1Q9H488 388 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 TMEM138Q9NPI0 162 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 DLL3Q9NYJ7 618 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 UBQLN2Q9UHD9 624 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 OPN4Q9UHM6 478 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 HDGFL3Q9Y3E1 203 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 RAB27BO00194 218 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ZNF35P13682 527 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ZNF43P17038 809 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ANOS1P23352 680 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ADH6P28332 368 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 HIST3H3Q16695 136 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ZNF260Q3ZCT1 412 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 DCAF12L2Q5VW00 463 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 IDO2Q6ZQW0 420 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 SLC22A24Q8N4F4 322 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 OR13C9Q8NGT0 318 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 CMBLQ96DG6 245 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 SOX7Q9BT81 388 aa13.25□□□□□ -0.29
TPM3-208ENST00000341485 ALX4Q9H161 411 aaPredicted RBP13.25□□□□□ -0.29
TPM3-208ENST00000341485 LRFN1Q9P244 771 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms