RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PMPCAQ10713 525 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 CEP78Q5JTW2 689 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 SFXN4Q6P4A7 337 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 LINC00299Q6ZSB3 139 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 BEND4Q6ZU67 534 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 PLEKHA1Q9HB21 404 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 HMG20AQ9NP66 347 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 SLC17A5Q9NRA2 495 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF224Q9NZL3 707 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 COMMD3Q9UBI1 195 aa15.13■□□□□ 0.01
CLDN4-201ENST00000340958 FREM1Q5H8C1 2179 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 GTF3C1Q12789 2109 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 TRBV5-7A0A0A0MS05 114 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 CTDSP2O14595 271 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 MAGEB3O15480 346 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 GLI4P10075 376 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 CRYGSP22914 178 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 APEX1P27695 318 aaKnown RBP15.12■□□□□ 0.01
CLDN4-201ENST00000340958 OTX1P32242 354 aaPredicted RBP15.12■□□□□ 0.01
CLDN4-201ENST00000340958 CASP6P55212 293 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 RSPO1Q2MKA7 263 aaPredicted RBP15.12■□□□□ 0.01
CLDN4-201ENST00000340958 STAC2Q6ZMT1 411 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 BORCS5Q969J3 196 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 SFXN3Q9BWM7 321 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 RHBDL2Q9NX52 303 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 CMAHPQ9Y471 501 aa15.12■□□□□ 0.01
CLDN4-201ENST00000340958 RP1L1Q8IWN7 2480 aaPredicted RBP15.11■□□□□ 0.01
CLDN4-201ENST00000340958 C5orf49A4QMS7 147 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 NOTOA8MTQ0 251 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF12P17014 697 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 STOMP27105 288 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 APLNRP35414 380 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 PPP3R1P63098 170 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 DDI2Q5TDH0 399 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 DOK3Q7L591 496 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 CCDC36Q8IYA8 594 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 NAXEQ8NCW5 288 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 CPEB3Q8NE35 698 aaKnown RBP15.11■□□□□ 0.01
CLDN4-201ENST00000340958 FGGYQ96C11 551 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 WDR12Q9GZL7 423 aaKnown RBP15.11■□□□□ 0.01
CLDN4-201ENST00000340958 TAS2R4Q9NYW5 299 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF319Q9P2F9 582 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 TENM4Q6N022 2769 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 ARHGAP21Q5T5U3 1957 aa15.11■□□□□ 0.01
CLDN4-201ENST00000340958 NCOA6Q14686 2063 aaPredicted RBP15.11■□□□□ 0.01
CLDN4-201ENST00000340958 CLDN25C9JDP6 229 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 PSMD7P51665 324 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF846Q147U1 533 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 TSC22D1Q15714 1073 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 NR2C2APQ86WQ0 139 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 SERPINA12Q8IW75 414 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 ACOT12Q8WYK0 555 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF275Q9NSD4 429 aaPredicted RBP15.1■□□□□ 0.01
CLDN4-201ENST00000340958 ATPIF1Q9UII2 106 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 V9GY05 133 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 DOCK7Q96N67 2140 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 TRAV8-7A0A075B6U6 113 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 A0A1W2PR80 420 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF503-AS2A6NEH8 195 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 A6NIN4 97 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 MTRF1O75570 445 aaKnown RBP15.1■□□□□ 0.01
CLDN4-201ENST00000340958 CGAP01215 116 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 BMP5P22003 454 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 OPRM1P35372 400 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 P2RY6Q15077 328 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 IGFBP7Q16270 282 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 GABRA6Q16445 453 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 SLC25A35Q3KQZ1 300 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 SPANXN2Q5MJ10 180 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 PRSS45Q7RTY3 260 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 MDP1Q86V88 176 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 CXorf67Q86X51 503 aaPredicted RBP15.1■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF671Q8TAW3 534 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 ABCB9Q9NP78 766 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF835Q9Y2P0 537 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 MYO18BQ8IUG5 2567 aa15.1■□□□□ 0.01
CLDN4-201ENST00000340958 A0A0U1RQV5 110 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 LMX1BO60663 402 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 OCMP0CE72 109 aaPredicted RBP15.09■□□□□ 0.01
CLDN4-201ENST00000340958 COX5BP10606 129 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 SLC2A2P11168 524 aaPredicted RBP15.09■□□□□ 0.01
CLDN4-201ENST00000340958 EPXP11678 715 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 CCL2P13500 99 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 CEACAM8P31997 349 aaPredicted RBP15.09■□□□□ 0.01
CLDN4-201ENST00000340958 SNAI3Q3KNW1 292 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 ZNF554Q86TJ5 538 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 GABRG1Q8N1C3 465 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 OR5D14Q8NGL3 314 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 KCTD12Q96CX2 325 aaKnown RBP15.09■□□□□ 0.01
CLDN4-201ENST00000340958 NOX3Q9HBY0 568 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 FOXJ3Q9UPW0 622 aa15.09■□□□□ 0.01
CLDN4-201ENST00000340958 UBR5O95071 2799 aaPredicted RBP15.09■□□□□ 0.01
CLDN4-201ENST00000340958 TRGV8A0A0C4DH27 118 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 A0A1B0GTI1 187 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 EEF1E1-BLOC1S5C9J1V9 151 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 EEF1E1O43324 174 aaKnown RBP15.08■□□□□ 0.01
CLDN4-201ENST00000340958 BMP4P12644 408 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 IL32P24001 234 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 HES5Q5TA89 166 aa15.08■□□□□ 0.01
CLDN4-201ENST00000340958 LRRTM1Q86UE6 522 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms