RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 A0A1W2PPC4 97 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ALG1L2C9J202 215 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 MT-ATP6P00846 226 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 GP1BAP07359 652 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 RAB3AP20336 220 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ZBTB25P24278 435 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 HSF1Q00613 529 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 MEF2DQ14814 521 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 FAM166AQ6J272 317 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 LCN10Q6JVE6 187 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 CCDC36Q8IYA8 594 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ESX1Q8N693 406 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 JSRP1Q96MG2 331 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-201ENST00000340437 SCPEP1Q9HB40 452 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 A0A1B0GV50 99 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 TLCD2A6NGC4 264 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 PSMB6P28072 239 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 AKR1C3P42330 323 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 OR3A4PP47883 348 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 SLC6A9P48067 706 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 STK11Q15831 433 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF260Q3ZCT1 412 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 GKN2Q86XP6 184 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 PUSL1Q8N0Z8 303 aaKnown RBP12.82□□□□□ -0.36
CPSF7-201ENST00000340437 PAQR4Q8N4S7 273 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-201ENST00000340437 THRSPQ92748 146 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ZDHHC12Q96GR4 267 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ICE1Q9Y2F5 2266 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ROS1P08922 2347 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 MS4A18H0YCH9 400 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ABCD4O14678 606 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 PVALBP20472 110 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-201ENST00000340437 MS4A18Q3C1V0 323 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 CLEC9AQ6UXN8 241 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 OR2AJ1Q8NGZ0 328 aa12.82□□□□□ -0.36
CPSF7-201ENST00000340437 ALX4Q9H161 411 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-201ENST00000340437 RPH3AQ9Y2J0 694 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-201ENST00000340437 SULT2B1O00204 365 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 OR2T1O43869 369 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 DXOO77932 396 aaKnown RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 ATG12O94817 140 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 SCGB1D2O95969 90 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 IGKV3-11P04433 115 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 CLRN1P58418 232 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 MFAP5Q13361 173 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 DNM1P34Q6PK57 102 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 FAM57BQ71RH2 274 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 SLC25A42Q86VD7 318 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF283Q8N7M2 679 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 OR5D14Q8NGL3 314 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 CCNL2Q96S94 520 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF701Q9NV72 531 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 ASH2LQ9UBL3 628 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 MRPS28Q9Y2Q9 187 aaKnown RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 TTRP02766 147 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 AMY2BP19961 511 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 CALCRP30988 508 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 CLDN6P56747 220 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 SCAND1P57086 179 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 ROM1Q03395 351 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 FOXF1Q12946 379 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 CHAF1BQ13112 559 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 SGCAQ16586 387 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 H3F3CQ6NXT2 135 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 C1orf198Q9H425 327 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 LMAN1LQ9HAT1 526 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 SLC17A5Q9NRA2 495 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 MED9Q9NWA0 146 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 THADAQ6YHU6 1953 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 SULT1C2O00338 296 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 RER1O15258 196 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 EIF4E2O60573 245 aaKnown RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF217O75362 1048 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 IGFBP3P17936 291 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 NME2P22392 152 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 DHPSP49366 369 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 RBM39Q14498 530 aaKnown RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 H1FNTQ75WM6 255 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-201ENST00000340437 SLC22A24Q8N4F4 322 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 RAB3CQ96E17 227 aa12.81□□□□□ -0.36
CPSF7-201ENST00000340437 MSGN1A6NI15 193 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 EFSO43281 561 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 TSPAN2O60636 221 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 TMEM127O75204 238 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 SNAPC5O75971 98 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 SERPINA5P05154 406 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 NFYBP25208 207 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 CD38P28907 300 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 MICBQ29980 383 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 MOB3CQ70IA8 216 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 MRGPRFQ96AM1 343 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-201ENST00000340437 DNTTIP1Q9H147 329 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 SLCO5A1Q9H2Y9 848 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 F5H5K5 113 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 ANOS1P23352 680 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 GLRA1P23415 457 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 OR51F2Q8NH61 342 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 ST7LQ8TDW4 575 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 MRPL38Q96DV4 380 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms