RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 OR52D1Q9H346 318 aa13.56□□□□□ -0.24
H3F3C-201ENST00000340398 MMADHCQ9H3L0 296 aaPredicted RBP13.56□□□□□ -0.24
H3F3C-201ENST00000340398 DCAF13Q9NV06 445 aaKnown RBP13.56□□□□□ -0.24
H3F3C-201ENST00000340398 ARGLU1Q9NWB6 273 aaPredicted RBP13.56□□□□□ -0.24
H3F3C-201ENST00000340398 MRPL22Q9NWU5 206 aaKnown RBP13.56□□□□□ -0.24
H3F3C-201ENST00000340398 RNF7Q9UBF6 113 aa13.56□□□□□ -0.24
H3F3C-201ENST00000340398 PRKDCP78527 4128 aaKnown RBP13.55□□□□□ -0.24
H3F3C-201ENST00000340398 CD300LBA8K4G0 201 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 TNFRSF13BO14836 293 aaPredicted RBP13.55□□□□□ -0.24
H3F3C-201ENST00000340398 ARPC3O15145 178 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 ENSAO43768 121 aaKnown RBP13.55□□□□□ -0.24
H3F3C-201ENST00000340398 FCN3O75636 299 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 TOX4O94842 621 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 MELTFP08582 738 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 MMP9P14780 707 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 RAG2P55895 527 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 ZNF826PQ6ZT77 177 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 ZBTB46Q86UZ6 589 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 SDR9C7Q8NEX9 313 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 OR2AE1Q8NHA4 323 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 FANK1Q8TC84 345 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 ZNRF4Q8WWF5 429 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 WFDC12Q8WWY7 111 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 ERGIC1Q969X5 290 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 NSRP1Q9H0G5 558 aaKnown RBP13.55□□□□□ -0.24
H3F3C-201ENST00000340398 BEX1Q9HBH7 125 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 SMURF1Q9HCE7 757 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 NOX4Q9NPH5 578 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 ERVK-18Q9QC07 812 aa13.55□□□□□ -0.24
H3F3C-201ENST00000340398 ZNF879B4DU55 563 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 ADAM20O43506 726 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 GYPAP02724 150 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 NOS3P29474 1203 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 SLC6A6P31641 620 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 PYCR1P32322 319 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 TPTEP56180 551 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 ECH1Q13011 328 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 KRT72Q14CN4 511 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 OR8B8Q15620 311 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 SLC36A3Q495N2 470 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 OLFML2AQ68BL7 652 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 C17orf107Q6ZR85 190 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 MRPL21Q7Z2W9 205 aaKnown RBP13.54□□□□□ -0.24
H3F3C-201ENST00000340398 OR4F5Q8NH21 305 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 WDFY2Q96P53 400 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 FN3KRPQ9HA64 309 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 KRCC1Q9NPI7 259 aaPredicted RBP13.54□□□□□ -0.24
H3F3C-201ENST00000340398 ADA2Q9NZK5 511 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 ABCD2Q9UBJ2 740 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 N6AMT1Q9Y5N5 214 aa13.54□□□□□ -0.24
H3F3C-201ENST00000340398 TVP23AA6NH52 213 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 M0R135 149 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 LGALS8O00214 317 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 P2RY10O00398 339 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 CCDC22O60826 627 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 GADD45GO95257 159 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 GRPP07492 148 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 PSKH1P11801 424 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 MSX2P35548 267 aaPredicted RBP13.53□□□□□ -0.24
H3F3C-201ENST00000340398 BPIFB3P59826 476 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 ARF6P62330 175 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 ELF3P78545 371 aaPredicted RBP13.53□□□□□ -0.24
H3F3C-201ENST00000340398 SPIBQ01892 262 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 ZNF362Q5T0B9 420 aaPredicted RBP13.53□□□□□ -0.24
H3F3C-201ENST00000340398 CD276Q5ZPR3 534 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 LYPD4Q6UWN0 246 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 PDZD9Q8IXQ8 264 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 FGFRL1Q8N441 504 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 CYB561A3Q8NBI2 242 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 ZNF799Q96GE5 643 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 CCT8L2Q96SF2 557 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 C1orf123Q9NWV4 160 aa13.53□□□□□ -0.24
H3F3C-201ENST00000340398 IGHV3OR15-7A0A075B7D8 119 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 A0A1B0GUS0 222 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 CLPSL1A2RUU4 121 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 GGT3PA6NGU5 568 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 OR10H3O60404 316 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 PTBP3O95758 552 aaKnown RBP13.52□□□□□ -0.25
H3F3C-201ENST00000340398 LIPFP07098 398 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 ZNF823P16415 610 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 NPY4RP50391 375 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.52□□□□□ -0.25
H3F3C-201ENST00000340398 GLYATL3Q5SZD4 288 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 BRICD5Q6PL45 260 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 ZNF620Q6ZNG0 422 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 RHOUQ7L0Q8 258 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 LNX2Q8N448 690 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 OR51L1Q8NGJ5 315 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 LHX4Q969G2 390 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 PYURFQ96I23 114 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 FAM71F1Q96KD3 344 aaPredicted RBP13.52□□□□□ -0.25
H3F3C-201ENST00000340398 DDOQ99489 341 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 CITED1Q99966 193 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 ADAT1Q9BUB4 502 aaKnown RBP13.52□□□□□ -0.25
H3F3C-201ENST00000340398 CCDC134Q9H6E4 229 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 ACOXLQ9NUZ1 547 aa13.52□□□□□ -0.25
H3F3C-201ENST00000340398 SAMD4AQ9UPU9 718 aaKnown RBP13.52□□□□□ -0.25
H3F3C-201ENST00000340398 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
H3F3C-201ENST00000340398 GMDSO60547 372 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms