RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 NDRG3Q9UGV2 375 aa12.6□□□□□ -0.39
NIPAL3-202ENST00000339255 GSTK1Q9Y2Q3 226 aa12.6□□□□□ -0.39
NIPAL3-202ENST00000339255 LOC100506127A0A0U1RQW1 187 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 A0A1B0GVI7 797 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 LOC107986453A0A1B0GWG9 222 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 SLC22A1O15245 554 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 SC5DO75845 299 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 CD2P06729 351 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 CELA3BP08861 270 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 CECR9P0C854 216 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 ZNF12P17014 697 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 CCL1P22362 96 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 TUBG1P23258 451 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 RPS11P62280 158 aaKnown RBP eCLIP12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 FABP5Q01469 135 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 Q499Y3 187 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 COMMD2Q86X83 199 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 OR5L1Q8NGL2 311 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 RGP1Q92546 391 aaPredicted RBP12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 OR51E2Q9H255 320 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 EXOSC4Q9NPD3 245 aaKnown RBP12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 TUBG2Q9NRH3 451 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 FLNCQ14315 2725 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 RELNP78509 3460 aa12.59□□□□□ -0.39
NIPAL3-202ENST00000339255 IGHV1-18A0A0C4DH31 117 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 TRBV5-5A0A0J9YX44 114 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 LOC390937A0A1W2PQ73 354 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 DHRS7CA6NNS2 312 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 ZNF879B4DU55 563 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 GABRPO00591 440 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 TBX1O43435 398 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 SYT7O43581 403 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 GPX5O75715 221 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 ARL6IP5O75915 188 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 IGLV3-1P01715 115 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 OCM2P0CE71 109 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 ZNF83P51522 516 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 TFF3Q07654 80 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 MALLQ13021 153 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 ODF4Q2M2E3 257 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 SNAI3Q3KNW1 292 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 ACSM3Q53FZ2 586 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 SEZ6L2Q6UXD5 910 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 TMEM108Q6UXF1 575 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 DOK3Q7L591 496 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 NAA40Q86UY6 237 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 MYPOPQ86VE0 399 aaPredicted RBP12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 OR51E1Q8TCB6 317 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 TSEN15Q8WW01 171 aaKnown RBP12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 AKAP1Q92667 903 aaKnown RBP eCLIP12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 KCNS3Q9BQ31 491 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 N6AMT1Q9Y5N5 214 aa12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 USP9XQ93008 2570 aaPredicted RBP12.58□□□□□ -0.4
NIPAL3-202ENST00000339255 H3BMQ9 156 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 MTRF1O75570 445 aaKnown RBP12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 CRYAAP02489 173 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 RAF1P04049 648 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 EPXP11678 715 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 CCL2P13500 99 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 ZNF35P13682 527 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 PTAFRP25105 342 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 ZMAT1Q5H9K5 638 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 TMEM91Q6ZNR0 172 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 PAQR4Q8N4S7 273 aaPredicted RBP12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 KBTBD8Q8NFY9 601 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 SPSB4Q96A44 273 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 KCTD7Q96MP8 289 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 C1QTNF6Q9BXI9 259 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 NAA50Q9GZZ1 169 aaKnown RBP12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 GPR84Q9NQS5 396 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 ZNF319Q9P2F9 582 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 DHDHQ9UQ10 334 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 UBR5O95071 2799 aaPredicted RBP12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 IGHV2OR16-5A0A0B4J2B6 119 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 M0R1B8 84 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 P2RY10O00398 339 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 WNT5AP41221 380 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 RAD52P43351 418 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 NAAAQ02083 359 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 CDSNQ15517 529 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 GFOD2Q3B7J2 385 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 Q6ZSR3 168 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 CEACAM19Q7Z692 300 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 RDH10Q8IZV5 341 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 OR13C3Q8NGS6 347 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 PPP1R14AQ96A00 147 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 TMEM106AQ96A25 262 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 REEP6Q96HR9 211 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 DERL3Q96Q80 235 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 OR14A2Q96R54 314 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 CENPOQ9BU64 300 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 BCL2L14Q9BZR8 327 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 NPAP1Q9NZP6 1156 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 SPEF1Q9Y4P9 236 aa12.57□□□□□ -0.4
NIPAL3-202ENST00000339255 A0A1B0GTI1 187 aa12.56□□□□□ -0.4
NIPAL3-202ENST00000339255 SMPD2O60906 423 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms