RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 RNF144BQ7Z419 303 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 KRTAP1-3Q8IUG1 177 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 RP1L1Q8IWN7 2480 aaPredicted RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 INTS1Q8N201 2190 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 OR1K1Q8NGR3 316 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 LGALS14Q8TCE9 139 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 BCL2L2Q92843 193 aaPredicted RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 SNRNP40Q96DI7 357 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 WDFY2Q96P53 400 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 PSMG3-AS1Q96PY0 264 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 SLITRK2Q9H156 845 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 OPN3Q9H1Y3 402 aaPredicted RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 ZCCHC4Q9H5U6 513 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 MOB1AQ9H8S9 216 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 ABCB10Q9NRK6 738 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 GLRX2Q9NS18 164 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 ZNF275Q9NSD4 429 aaPredicted RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 ASF1BQ9NVP2 202 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 C14orf119Q9NWQ9 140 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 B3GNT2Q9NY97 397 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 ZZEF1O43149 2961 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 ZGRF1Q86YA3 2104 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 ATRXP46100 2492 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 PRR14LQ5THK1 2151 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 MBD3L4A6NDZ8 208 aaPredicted RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 MBD3L3A6NE82 208 aaPredicted RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 FABP12A6NFH5 140 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 MBD3L5A6NJ08 208 aaPredicted RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 FAM25AB3EWG3 89 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 FAM25CB3EWG5 89 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 FAM25GB3EWG6 89 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 AIPO00170 330 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 PDCD5O14737 125 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 IGLV3-1P01715 115 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 LCATP04180 440 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 CD2P06729 351 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 FSTP19883 344 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 CCNOP22674 350 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 CFL1P23528 166 aaKnown RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 GNALP38405 381 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 EVX1P49640 407 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 TPTEP56180 551 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 PER3P56645 1201 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 RAB1AP62820 205 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 ZNF45Q02386 682 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 TBRG1Q3YBR2 411 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SLC36A2Q495M3 483 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 NRN1LQ496H8 165 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 MZT2AQ6P582 158 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 FAM131AQ6UXB0 335 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 MYPOPQ86VE0 399 aaPredicted RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 ZNF584Q8IVC4 421 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 ZNF610Q8N9Z0 462 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR4M1Q8NGD0 313 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR13C9Q8NGT0 318 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR14K1Q8NGZ2 314 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 MBD3L2Q8NHZ7 208 aaPredicted RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 ZNF671Q8TAW3 534 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 FAM57AQ8TBR7 257 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SPTSSAQ969W0 71 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SGK3Q96BR1 496 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SLX1AQ9BQ83 275 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SRRQ9GZT4 340 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 LIN7BQ9HAP6 207 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 CGGBP1Q9UFW8 167 aaPredicted RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR5V1Q9UGF6 321 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SH3BGRL2Q9UJC5 107 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SPTA1P02549 2419 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 A0A0G2JMP0 313 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 A0A0X1KG70 313 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 C5orf49A4QMS7 147 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 UPK1BO75841 260 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 CGAP01215 116 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 EDN3P14138 238 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 FAHP16930 419 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 ZNF20P17024 532 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 CCL1P22362 96 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 ECH1Q13011 328 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 TNK1Q13470 666 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 STK11Q15831 433 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 BAK1Q16611 211 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 KRTCAP3Q53RY4 240 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 GLYATL3Q5SZD4 288 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 C1orf185Q5T7R7 199 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 STEAP3Q658P3 488 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR2A2Q6IF42 318 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 ANKRD16Q6P6B7 361 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 DRAM2Q6UX65 266 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 Q6ZT83 130 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 MDP1Q86V88 176 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 DOLPP1Q86YN1 238 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 CROCCP3Q8IVE0 287 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SERPINA12Q8IW75 414 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 IZUMO1Q8IYV9 350 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR5AS1Q8N127 324 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 PAQR4Q8N4S7 273 aaPredicted RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR4M2Q8NGB6 313 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR52N4Q8NGI2 321 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 OR6K3Q8NGY3 331 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 ACOT12Q8WYK0 555 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms