RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 V9GYS6 101 aa14.24□□□□□ -0.13
HPS1-202ENST00000338546 SLC22A20A6NK97 555 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 LDLRAD4O15165 306 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 DHRS3O75911 302 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 ECDO95905 644 aaPredicted RBP14.23□□□□□ -0.13
HPS1-202ENST00000338546 MMP7P09237 267 aaPredicted RBP14.23□□□□□ -0.13
HPS1-202ENST00000338546 FAM157BP0CG42 384 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 SLC2A1P11166 492 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 GABRA1P14867 456 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 ARSBP15848 533 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 CDK2P24941 298 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 THBS4P35443 961 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 EIF2S3P41091 472 aaKnown RBP14.23□□□□□ -0.13
HPS1-202ENST00000338546 SLC6A9P48067 706 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 PSG4Q00888 419 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 SPOCK1Q08629 439 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 SLC36A2Q495M3 483 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 DNM1P46Q6ZS02 220 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 ADGRE4PQ86SQ3 457 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 COMMD2Q86X83 199 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 SKA3Q8IX90 412 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 TOMM5Q8N4H5 51 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 OR51A2Q8NGJ7 313 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 PP6455Q8WZ26 134 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 NEURL2Q9BR09 285 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 RGCCQ9H4X1 137 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 PLSCR2Q9NRY7 297 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 UPB1Q9UBR1 384 aa14.23□□□□□ -0.13
HPS1-202ENST00000338546 RBMX2Q9Y388 322 aaKnown RBP14.23□□□□□ -0.13
HPS1-202ENST00000338546 CEP250Q9BV73 2442 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 LINC00854A0A1B0GVQ3 168 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 FAM240BA0A1B0GVZ2 78 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 DCDC2BA2VCK2 349 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 LANCL1O43813 399 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 SSX4O60224 188 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 LMX1BO60663 402 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 CTAG2O75638 210 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 ADRB1P08588 477 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 COX5BP10606 129 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 KIR2DL3P43628 341 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 AP3S2P59780 193 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 ARF1P84077 181 aaKnown RBP14.22□□□□□ -0.13
HPS1-202ENST00000338546 ZNF774Q6NX45 483 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 PLET1Q6UQ28 207 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 UTS2BQ765I0 119 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 FGD2Q7Z6J4 655 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 ZNF100Q8IYN0 542 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 JAGN1Q8N5M9 183 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 FCAMRQ8WWV6 532 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 PHF21AQ96BD5 680 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 SARAFQ96BY9 339 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 GMPPAQ96IJ6 420 aaPredicted RBP14.22□□□□□ -0.13
HPS1-202ENST00000338546 NEDD4LQ96PU5 975 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 WNT5BQ9H1J7 359 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 RHBDD3Q9Y3P4 386 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 CACNG2Q9Y698 323 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 TMEM272A0A1B0GTI8 110 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 KLK10O43240 276 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 BPNT1O95861 308 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 GSTT2BP0CG30 244 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 SLC6A1P30531 599 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 TAS2R20P59543 309 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 DGCR2P98153 550 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 ZNF169Q14929 603 aaPredicted RBP14.22□□□□□ -0.13
HPS1-202ENST00000338546 DTX3Q8N9I9 347 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 FAM71F1Q96KD3 344 aaPredicted RBP14.22□□□□□ -0.13
HPS1-202ENST00000338546 RNF121Q9H920 327 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 ETAA1Q9NY74 926 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 COPZ2Q9P299 210 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 N6AMT1Q9Y5N5 214 aa14.22□□□□□ -0.13
HPS1-202ENST00000338546 GGT3PA6NGU5 568 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 SS18L1O75177 396 aaPredicted RBP14.21□□□□□ -0.14
HPS1-202ENST00000338546 SCGNO76038 276 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 HNRNPCP07910 306 aaKnown RBP eCLIP14.21□□□□□ -0.14
HPS1-202ENST00000338546 AGTR1P30556 359 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 HTR5AP47898 357 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 PMP22Q01453 160 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 SSBP1Q04837 148 aaKnown RBP14.21□□□□□ -0.14
HPS1-202ENST00000338546 GPR176Q14439 515 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 FAM189A2Q15884 450 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 AGAP6Q5VW22 663 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 RAB12Q6IQ22 244 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 CELF2-AS1Q8N7Q2 184 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 SNIP1Q8TAD8 396 aaKnown RBP14.21□□□□□ -0.14
HPS1-202ENST00000338546 SNRNP27Q8WVK2 155 aaKnown RBP14.21□□□□□ -0.14
HPS1-202ENST00000338546 LYZL4Q96KX0 146 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 CGGBP1Q9UFW8 167 aaPredicted RBP14.21□□□□□ -0.14
HPS1-202ENST00000338546 RAB22AQ9UL26 194 aa14.21□□□□□ -0.14
HPS1-202ENST00000338546 CIB4A0PJX0 185 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 NAP1L6A6NFF2 107 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 TGM6O95932 706 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 CD3GP09693 182 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 UBBP0CG47 229 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 PRF1P14222 555 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 ZNF93P35789 620 aaPredicted RBP14.2□□□□□ -0.14
HPS1-202ENST00000338546 ARR3P36575 388 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 KLF9Q13886 244 aaPredicted RBP14.2□□□□□ -0.14
HPS1-202ENST00000338546 C3AR1Q16581 482 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 RPUSD3Q6P087 351 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms