RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 A0A1B0GTQ1 180 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 G3V3Y1 287 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 HS3ST1O14792 307 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 KLK8O60259 260 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 NOVA1P51513 510 aaKnown RBP11.89□□□□□ -0.51
HLCS-201ENST00000336648 NHLH1Q02575 133 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 NHLH2Q02577 135 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 CLN3Q13286 438 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 TMEM99Q8N816 258 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 ZMAT3Q9HA38 289 aaKnown RBP11.89□□□□□ -0.51
HLCS-201ENST00000336648 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
HLCS-201ENST00000336648 IFITM5A6NNB3 132 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 RAB27BO00194 218 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 IL2RAP01589 272 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 CRYAAP02489 173 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 CCL11P51671 97 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 FZD2Q14332 565 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 ZNF77Q15935 545 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 WDR74Q6RFH5 385 aaPredicted RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 CTSFQ9UBX1 484 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 SLC17A4Q9Y2C5 497 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 M0QZ24 198 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 BMI1P35226 326 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 NKAIN2Q5VXU1 208 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 PTCRAQ6ISU1 281 aaPredicted RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 PRSS45Q7RTY3 260 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 BCDIN3DQ7Z5W3 292 aaKnown RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 AMIGO3Q86WK7 504 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 UBAC2Q8NBM4 344 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 MMP17Q9ULZ9 603 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 TRAV1-2A0A0B4J238 106 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 PRSS37A4D1T9 235 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 AREGP15514 252 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 RPA2P15927 270 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 SRP9P49458 86 aaKnown RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 CDK5R1Q15078 307 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 TOMM34Q15785 309 aaPredicted RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 RXFP4Q8TDU9 374 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 TMED6Q8WW62 240 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 C12orf49Q9H741 205 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 CYB5R1Q9UHQ9 305 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 HDGFL3Q9Y3E1 203 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 EFSO43281 561 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 FUCA1P04066 466 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 LIMS3P0CW19 117 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 LIMS4P0CW20 117 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 HIST1H1CP16403 213 aaKnown RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 OR1D5P58170 312 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 LYG2Q86SG7 212 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 OR2A1Q8NGT9 310 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 OR1A1Q9P1Q5 309 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 CCL26Q9Y258 94 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 MYH6P13533 1939 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 A0A1W2PR48 441 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 RRASP10301 218 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 APEHP13798 732 aaKnown RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 EDN3P14138 238 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 GLRA1P23415 457 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 EVX1P49640 407 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 ADPRHP54922 357 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 OR2AK2Q8NG84 335 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 OR5AP2Q8NGF4 316 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 SPPL3Q8TCT6 385 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 TTC9Q92623 222 aa11.88□□□□□ -0.51
HLCS-201ENST00000336648 ESRP2Q9H6T0 727 aaKnown RBP11.88□□□□□ -0.51
HLCS-201ENST00000336648 SERPINE3A8MV23 424 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 CST2P09228 141 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 SMIM18P0DKX4 95 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 CD37P11049 281 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 GABRB1P18505 474 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 COL9A2Q14055 689 aaPredicted RBP11.87□□□□□ -0.51
HLCS-201ENST00000336648 ZNF750Q32MQ0 723 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 TRMT12Q53H54 448 aaKnown RBP11.87□□□□□ -0.51
HLCS-201ENST00000336648 ZNF468Q5VIY5 522 aaPredicted RBP11.87□□□□□ -0.51
HLCS-201ENST00000336648 ANKRD16Q6P6B7 361 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 ZDHHC23Q8IYP9 409 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 OR10D4PQ8NGN7 298 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 SPANXN5Q5MJ07 72 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 CADM3Q8N126 398 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 DYRK2Q92630 601 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 A0A0B4J203 849 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 GPX5O75715 221 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 TMEM268Q5VZI3 342 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 OR52N5Q8NH56 324 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 FOXJ3Q9UPW0 622 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 FRG2CA6NGY1 282 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 RNASEK-C17orf49H0YIS7 233 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 M0QZK8 103 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
HLCS-201ENST00000336648 GLULP15104 373 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 DGCR2P98153 550 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 UQCC3Q6UW78 93 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 ABI3BPQ7Z7G0 1075 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 MRPS24Q96EL2 167 aaKnown RBP11.87□□□□□ -0.51
HLCS-201ENST00000336648 U3KQ87 197 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 TIAM2Q8IVF5 1701 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 FIGNL2A6NMB9 653 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms