RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 WSB1Q9Y6I7 421 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 G3V3Y1 287 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 AKR7A3O95154 331 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 B3GALT4O96024 378 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 CST4P01036 141 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 OBP2AQ9NY56 170 aa8.92□□□□□ -0.98
COL4A6-201ENST00000334504 BOKQ9UMX3 212 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-201ENST00000334504 COL1A1P02452 1464 aaPredicted RBP8.92□□□□□ -0.98
COL4A6-201ENST00000334504 H3BP45 60 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 M0R1X1 148 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 SIRPB1O00241 398 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 HMGN4O00479 90 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 COX7A2P2O60397 106 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 WNT1P04628 370 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 EPXP11678 715 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 TCN2P20062 427 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 GPR12P47775 334 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 PKIAP61925 76 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 C17orf67Q0P5P2 114 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM267Q0VDI3 215 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 CDK5R1Q15078 307 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 MAMSTRQ6ZN01 415 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 DERL3Q96Q80 235 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 PCED1AQ9H1Q7 454 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 TIMM9Q9Y5J7 89 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 MYH11P35749 1972 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 IGKV6-21A0A0C4DH24 114 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 CLEC18AA5D8T8 446 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 LIMS3P0CW19 117 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 LIMS4P0CW20 117 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 OR5H8P0DN80 308 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 ABCD3P28288 659 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 CDKN3Q16667 212 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 FAM209BQ5JX69 171 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 THEM4Q5T1C6 240 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 CLEC18CQ8NCF0 446 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 SLC25A37Q9NYZ2 338 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 NTHL1P78549 312 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 LYSMD4Q5XG99 296 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 FCRL6Q6DN72 434 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM207Q6UWW9 146 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 RFLNAQ6ZTI6 216 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 LHFPL2Q6ZUX7 228 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 CBLN2Q8IUK8 224 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 CISD2Q8N5K1 135 aaKnown RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 TMEM40Q8WWA1 233 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 MUCL1Q96DR8 90 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 SLIRPQ9GZT3 109 aaKnown RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 ZNF346Q9UL40 294 aaKnown RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 ZNF142P52746 1687 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 OR2M5A3KFT3 312 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 PRAMEF26H0Y7S4 382 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 BCAT2O15382 392 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 MT-ATP6P00846 226 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 TAZQ16635 292 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 RPEL1Q2QD12 228 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 H1FNTQ75WM6 255 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 IKZF5Q9H5V7 419 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 IL23AQ9NPF7 189 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 DECR2Q9NUI1 292 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 ZNF98A6NK75 572 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 ARG1P05089 322 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 LYRM7Q5U5X0 104 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 FAM78BQ5VT40 261 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 PLPP6Q8IY26 295 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 C19orf47Q8N9M1 422 aaKnown RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 OR4S1Q8NGB4 309 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 SLC25A19Q9HC21 320 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 KNDC1Q76NI1 1749 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 TCRBV16S1A1N1A0A5B0 115 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 MYADML2A6NDP7 307 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 DIO1P49895 249 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 ETFBKMTQ8IXQ9 262 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 RTN4IP1Q8WWV3 396 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 PDLIM7Q9NR12 457 aa8.91□□□□□ -0.98
COL4A6-201ENST00000334504 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.91□□□□□ -0.98
COL4A6-201ENST00000334504 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 YIF1AO95070 293 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 CST5P28325 142 aaPredicted RBP8.9□□□□□ -0.98
COL4A6-201ENST00000334504 CHRNA7P36544 502 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 BCL6P41182 706 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 CIB3Q96Q77 187 aaPredicted RBP8.9□□□□□ -0.98
COL4A6-201ENST00000334504 EMC6Q9BV81 110 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 DUSP13Q9UII6 198 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 SLC22A13Q9Y226 551 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 C4orf47A7E2U8 309 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 EN2P19622 333 aaPredicted RBP8.9□□□□□ -0.98
COL4A6-201ENST00000334504 PSMB2P49721 201 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 SSBP1Q04837 148 aaKnown RBP8.9□□□□□ -0.98
COL4A6-201ENST00000334504 EGR3Q06889 387 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 SEMA3BQ13214 749 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 FAM27D1Q5T7N8 215 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 UBE3DQ7Z6J8 389 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 TSEN54Q7Z6J9 526 aaKnown RBP8.9□□□□□ -0.98
COL4A6-201ENST00000334504 SYS1Q8N2H4 156 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 OR2D3Q8NGH3 330 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 OR52N4Q8NGI2 321 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 RLN3Q8WXF3 142 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 ISOC2Q96AB3 205 aa8.9□□□□□ -0.98
COL4A6-201ENST00000334504 RTL8AQ9BWD3 113 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms