RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 IGLV3-12A0A075B6K2 115 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 A0A087WZY1 265 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 A0A1B0GUH1 482 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 SELENOPP49908 381 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 MMP15P51511 669 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 DSCR4P56555 118 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 GSG1Q2KHT4 349 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 LINC00346Q8IVM7 164 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 BMPERQ8N8U9 685 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 PBDC1Q9BVG4 233 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 RBM24Q9BX46 236 aaKnown RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 OR11A1Q9GZK7 315 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 STEAP1Q9UHE8 339 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 TMEM212A6NML5 194 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 TO15178 435 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 HSPA12AO43301 675 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 RECKO95980 971 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 CD14P08571 375 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 GLI4P10075 376 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 ENPP1P22413 925 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 DAP3P51398 398 aaKnown RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 WIPI1Q5MNZ9 446 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 ZNF704Q6ZNC4 412 aaPredicted RBP10.58□□□□□ -0.72
HDAC6-201ENST00000334136 DBX2Q6ZNG2 339 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 TMEM200AQ86VY9 491 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 OR5T1Q8NG75 326 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 OR4C16Q8NGL9 310 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 OR10Z1Q8NGY1 313 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 OR14K1Q8NGZ2 314 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 GPA33Q99795 319 aa10.58□□□□□ -0.72
HDAC6-201ENST00000334136 WDR87Q6ZQQ6 2873 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 MEIKINA0A087WXM9 373 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 A0A1W2PNR3 127 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 F5H5K5 113 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 CDC42EP2O14613 210 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 SULT1B1O43704 296 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 PMS2P2O95744 297 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 CNR1P21554 472 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 PAN3Q58A45 887 aaKnown RBP10.57□□□□□ -0.72
HDAC6-201ENST00000334136 GPR157Q5UAW9 335 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 MEX3BQ6ZN04 569 aaKnown RBP10.57□□□□□ -0.72
HDAC6-201ENST00000334136 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-201ENST00000334136 FNDC9Q8TBE3 224 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 RNF141Q8WVD5 230 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 C14orf79Q96F83 325 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 ADAMTS9Q9P2N4 1935 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 ANKUB1A6NFN9 424 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 SPI1P17947 270 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 PI3P19957 117 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 ZNF117Q03924 483 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 PLP2Q04941 152 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 ZNF141Q15928 474 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 ZAR1Q86SH2 424 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 OR4K15Q8NH41 348 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 NXF2Q9GZY0 626 aaKnown RBP10.57□□□□□ -0.72
HDAC6-201ENST00000334136 TAS2R5Q9NYW4 299 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 SNRNP200O75643 2136 aaKnown RBP10.57□□□□□ -0.72
HDAC6-201ENST00000334136 MRPL33O75394 65 aaKnown RBP10.57□□□□□ -0.72
HDAC6-201ENST00000334136 CCL3P10147 92 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 NPY4RP50391 375 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 FOXF1Q12946 379 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 LGALSLQ3ZCW2 172 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-201ENST00000334136 CBLN3Q6UW01 205 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 SGPP2Q8IWX5 399 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 CXorf58Q96LI9 332 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 PIGMQ9H3S5 423 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 EHFQ9NZC4 300 aa10.57□□□□□ -0.72
HDAC6-201ENST00000334136 ZNF629Q9UEG4 869 aaPredicted RBP10.57□□□□□ -0.72
HDAC6-201ENST00000334136 NCOR2Q9Y618 2525 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 TRGV5A0A0B4J1U4 118 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 A6NIZ1 184 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 PMP2P02689 132 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 CD96P40200 585 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 RAP1BP61224 184 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 RAP1AP62834 184 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 CDCP2Q5VXM1 449 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 MDGA2Q7Z553 956 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 YIPF5Q969M3 257 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 CTHRC1Q96CG8 243 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 SLC25A21Q9BQT8 299 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-201ENST00000334136 UBE2J1Q9Y385 318 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-201ENST00000334136 IGKV3D-11A0A0A0MRZ8 115 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 GLCEO94923 617 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 CD80P33681 288 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 AKR1C3P42330 323 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 FLI1Q01543 452 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-201ENST00000334136 BDH1Q02338 343 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 MELKQ14680 651 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 AADACL4Q5VUY2 407 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 TMEM244Q5VVB8 128 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 TMEM81Q6P7N7 255 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 THSD4Q6ZMP0 1018 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 DPY19L2P2Q6ZN68 376 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 HIST1H2AAQ96QV6 131 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 UQCC2Q9BRT2 126 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 ZNF442Q9H7R0 627 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 WDR76Q9H967 626 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 CRABP1P29762 137 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 CSNK1A1P48729 337 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms