RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 FADS6Q8N9I5 356 aa16.73■□□□□ 0.27
RFTN1-201ENST00000334133 OR6X1Q8NH79 312 aa16.73■□□□□ 0.27
RFTN1-201ENST00000334133 PNPLA2Q96AD5 504 aa16.73■□□□□ 0.27
RFTN1-201ENST00000334133 ZNF837Q96EG3 531 aaPredicted RBP16.73■□□□□ 0.27
RFTN1-201ENST00000334133 RAB22AQ9UL26 194 aa16.73■□□□□ 0.27
RFTN1-201ENST00000334133 TPPPO94811 219 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 FGF5P12034 268 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 ZNF17P17021 662 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 HRH1P35367 487 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 C3P1Q6ZMU1 363 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 GPER1Q99527 375 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 RBM24Q9BX46 236 aaKnown RBP16.72■□□□□ 0.27
RFTN1-201ENST00000334133 VSIG4Q9Y279 399 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 KNTC1P50748 2209 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 PMS2P1A4D2B8 440 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 AQP7P3A6NL99 342 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 PMP2P02689 132 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 RNASE10Q5GAN6 216 aaKnown RBP16.72■□□□□ 0.27
RFTN1-201ENST00000334133 AGBL5Q8NDL9 886 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 COQ8AQ8NI60 647 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 AQP3Q92482 292 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 TMEM41AQ96HV5 264 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 PNRC2Q9NPJ4 139 aaKnown RBP16.72■□□□□ 0.27
RFTN1-201ENST00000334133 FAM186AA6NE01 2351 aa16.72■□□□□ 0.27
RFTN1-201ENST00000334133 LINC00862A6NCI5 91 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 SOCS1O15524 211 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 CD37P11049 281 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 GPR85P60893 370 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 RAB14P61106 215 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 ATXN7L3Q14CW9 347 aaPredicted RBP16.71■□□□□ 0.27
RFTN1-201ENST00000334133 C12orf45Q8N5I9 185 aaPredicted RBP16.71■□□□□ 0.27
RFTN1-201ENST00000334133 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.71■□□□□ 0.27
RFTN1-201ENST00000334133 PROK2Q9HC23 129 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 FANCFQ9NPI8 374 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 KCNK7Q9Y2U2 307 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 A0A0G2JMM0 328 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 A0A1W2PPB8 328 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 A0A1W2PRS3 328 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 KIR3DP1A8MWS1 328 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 TNFSF11O14788 317 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 HLA-AP01891 365 aaKnown RBP16.71■□□□□ 0.27
RFTN1-201ENST00000334133 DBHP09172 617 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 QRFPP83859 136 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 DHRS2Q13268 280 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 HLXQ14774 488 aaPredicted RBP16.71■□□□□ 0.27
RFTN1-201ENST00000334133 RHOUQ7L0Q8 258 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 OR5AS1Q8N127 324 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 STEAP2Q8NFT2 490 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 CASTOR1Q8WTX7 329 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 CCDC120Q96HB5 630 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 IMMP1LQ96LU5 166 aa16.71■□□□□ 0.27
RFTN1-201ENST00000334133 MRPS28Q9Y2Q9 187 aaKnown RBP16.71■□□□□ 0.27
RFTN1-201ENST00000334133 NOP16Q9Y3C1 178 aaKnown RBP16.71■□□□□ 0.27
RFTN1-201ENST00000334133 PRRC2CQ9Y520 2896 aaKnown RBP16.71■□□□□ 0.26
RFTN1-201ENST00000334133 A0A0A6YYD4 124 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 FAM25EA8MYX2 175 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 PPP3CBP16298 524 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 TCEAL6Q6IPX3 200 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 TMUB2Q71RG4 321 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.71■□□□□ 0.26
RFTN1-201ENST00000334133 OR10K1Q8NGX5 313 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 TCEAL3Q969E4 200 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 MRGPRFQ96AM1 343 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 FOXRED1Q96CU9 486 aaPredicted RBP16.71■□□□□ 0.26
RFTN1-201ENST00000334133 RADILQ96JH8 1075 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 GSX2Q9BZM3 304 aa16.71■□□□□ 0.26
RFTN1-201ENST00000334133 CD96P40200 585 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 LY6G6FQ5SQ64 297 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 SCPEP1Q9HB40 452 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 IFT46Q9NQC8 304 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 DKKL1Q9UK85 242 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 TMEM265A0A087WTH1 108 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 SULT1C2O00338 296 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 SLC35A1P78382 337 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 CAMK2BQ13554 666 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 IL11RAQ14626 422 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 BEX5Q5H9J7 111 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 YRDCQ86U90 279 aaKnown RBP16.7■□□□□ 0.26
RFTN1-201ENST00000334133 HDGFL3Q9Y3E1 203 aa16.7■□□□□ 0.26
RFTN1-201ENST00000334133 C9J4A7 227 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 ZIC3O60481 467 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 AKR1C4P17516 323 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 S100A11P31949 105 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 OTX2P32243 289 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 EIF1P41567 113 aaKnown RBP16.69■□□□□ 0.26
RFTN1-201ENST00000334133 CSNK1A1P48729 337 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 RFPL4BQ6ZWI9 263 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 RPS19BP1Q86WX3 136 aaKnown RBP16.69■□□□□ 0.26
RFTN1-201ENST00000334133 CST11Q9H112 138 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 UPB1Q9UBR1 384 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 KCNN3Q9UGI6 736 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 PLEKHA6Q9Y2H5 1048 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 NSG1A0A0A6YYJ2 146 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 KCNAB3O43448 404 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 SSX5O60225 188 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 SPDEFO95238 335 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 VAMP1P23763 118 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 SSR4P51571 173 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 CLLU1Q5K131 121 aa16.69■□□□□ 0.26
RFTN1-201ENST00000334133 C1QL2Q7Z5L3 287 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms