RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 PLXNA1Q9UIW2 1896 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 ADAMTS7Q9UKP4 1686 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 CT62P0C5K7 136 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 CCL2P13500 99 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 FAHP16930 419 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 PDZK1IP1Q13113 114 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 CEACAM16Q2WEN9 425 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 EMC4Q5J8M3 183 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 MVB12AQ96EY5 273 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 MRGPRX4Q96LA9 322 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 SIGLEC11Q96RL6 698 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 EGLN1Q9GZT9 426 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 BCO1Q9HAY6 547 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 C20orf141Q9NUB4 165 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 SLCO1B1Q9Y6L6 691 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 XIRP1Q702N8 1843 aaKnown RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 A0A0D9SG52 128 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 TMEM129A0AVI4 362 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 MKRN2OSH3BPM6 223 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 EML2O95834 649 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 ARR3P36575 388 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 PCBP3P57721 371 aaKnown RBP9.19□□□□□ -0.94
CHD3-201ENST00000330494 H2BFWTQ7Z2G1 175 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 SLC35G3Q8N808 338 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 SLC30A7Q8NEW0 376 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 TECTBQ96PL2 329 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 PRELID3BQ9Y3B1 194 aa9.19□□□□□ -0.94
CHD3-201ENST00000330494 LILRA5A6NI73 299 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 FXYD1O00168 92 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 SH2D1BO14796 132 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 HNF1AP20823 631 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 COTL1Q14019 142 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 SLC25A35Q3KQZ1 300 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 IGSF11Q5DX21 431 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 BOD1Q96IK1 185 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 DERL3Q96Q80 235 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 SLC39A9Q9NUM3 307 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 hCG_1809904A0A1W2PP81 198 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 A0A1W2PPE2 198 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 A0A1W2PR64 198 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 A0A1W2PRV1 198 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 RAB11AP62491 216 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 TRMT61AQ96FX7 289 aaKnown RBP9.18□□□□□ -0.94
CHD3-201ENST00000330494 LY75O60449 1722 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 PATE3B3GLJ2 98 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 WDR1O75083 606 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 SULT1C4O75897 302 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 ZNF766Q5HY98 468 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 SPINK14Q6IE38 97 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 PWWP2BQ6NUJ5 590 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 ADAM5Q6NVV9 412 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 TMPRSS7Q7RTY8 843 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 ANKRD37Q7Z713 158 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 KIRREL1Q96J84 757 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 GABARAPL1Q9H0R8 117 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 AUNIPQ9H7T9 357 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 SIRT5Q9NXA8 310 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 A0A087WUJ7 227 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 IGHV1OR21-1A0A087WYE8 117 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 CCDC187A0A096LP49 1063 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 ANKUB1A6NFN9 424 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 CBR3O75828 277 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 FOXL2P58012 376 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 GUCA2AQ02747 115 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 ZNF117Q03924 483 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 SLC17A1Q14916 467 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 FAM122BQ7Z309 247 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 PLPP5Q8NEB5 264 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 ADAM19Q9H013 955 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 PLAC1Q9HBJ0 212 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 NDUFB11Q9NX14 153 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 OCIAD1Q9NX40 245 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 R4GMQ9 66 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 TRGV5A0A0B4J1U4 118 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 ZFP92A6NM28 416 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 H7C1Q1 480 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 CLEC3BP05452 202 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 DSCR4P56555 118 aaPredicted RBP9.18□□□□□ -0.94
CHD3-201ENST00000330494 B3GNTL1Q67FW5 361 aaPredicted RBP9.18□□□□□ -0.94
CHD3-201ENST00000330494 OR1S2Q8NGQ3 325 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 P4HTMQ9NXG6 502 aa9.18□□□□□ -0.94
CHD3-201ENST00000330494 MBD1Q9UIS9 605 aaPredicted RBP9.18□□□□□ -0.94
CHD3-201ENST00000330494 LGALS8O00214 317 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 SSSCA1O60232 199 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 NTN1O95631 604 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 C3AR1Q16581 482 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 PRICKLE4Q2TBC4 344 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 LHFPL2Q6ZUX7 228 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 BAGE3Q86Y29 109 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 BAGE2Q86Y30 109 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 OR2V1Q8NHB1 315 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 GABARAPH6UMI1 98 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 ANGPTL7O43827 346 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 DUSP1P28562 367 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 HRH1P35367 487 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 TAGLN2P37802 199 aaKnown RBP9.17□□□□□ -0.94
CHD3-201ENST00000330494 ZNF92Q03936 586 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 HMGN3Q15651 99 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 CLEC9AQ6UXN8 241 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 TFAP2EQ6VUC0 442 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms