RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PAPD5Q8NDF8 572 aaKnown RBP12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 OR4K5Q8NGD3 323 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 OR52J3Q8NH60 311 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 OR2T6Q8NHC8 308 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 SLC25A40Q8TBP6 338 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 WDFY2Q96P53 400 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 SH3GL3Q99963 347 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 TMEM246Q9BRR3 403 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 OR2J1Q9GZK6 312 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 PALMDQ9NP74 551 aa12.15□□□□□ -0.46
CTHRC1-201ENST00000330295 IQCMA0A1B0GVH7 501 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 AHCYL1O43865 530 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 DIRAS1O95057 198 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 NDUFB2O95178 105 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 CD14P08571 375 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 FBP1P09467 338 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 HOXD3P31249 432 aaPredicted RBP12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 RRM2P31350 389 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 SLC35A2P78381 396 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 PLP2Q04941 152 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 NKAPLQ5M9Q1 402 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 SLC16A14Q7RTX9 510 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 LINC00471Q8N535 108 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 OR4C13Q8NGP0 309 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 OR13C2Q8NGS9 318 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 PPP1R35Q8TAP8 253 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 ITLN1Q8WWA0 313 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 MCHR2Q969V1 340 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 RCC1LQ96I51 464 aaKnown RBP12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 FAM46AQ96IP4 442 aaKnown RBP12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 MAP6Q96JE9 813 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 DHRS1Q96LJ7 313 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 SEPHS2Q99611 448 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 THTPAQ9BU02 230 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 MRPL13Q9BYD1 178 aaKnown RBP12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 TMEM38BQ9NVV0 291 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 TAS2R1Q9NYW7 299 aa12.14□□□□□ -0.47
CTHRC1-201ENST00000330295 TRBV4-1A0A0J9YWV2 114 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 RBMY1BA6NDE4 496 aaKnown RBP12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 RBMY1EA6NEQ0 496 aaKnown RBP12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 UNC119BA6NIH7 251 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 OR10H3O60404 316 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 ZFPL1O95159 310 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 LIPFP07098 398 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 RBMY1DP0C7P1 496 aaKnown RBP12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 T-ENOLP0DO92 83 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 CCNOP22674 350 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 APLNRP35414 380 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 WNT5AP41221 380 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 RASSF2P50749 326 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 HIST3H3Q16695 136 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 GPR139Q6DWJ6 353 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 LCN8Q6JVE9 175 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 TSEN54Q7Z6J9 526 aaKnown RBP12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 IGFN1Q86VF2 1251 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 PDZD9Q8IXQ8 264 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 OR5R1Q8NH85 324 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 ASB9Q96DX5 294 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 RSRC1Q96IZ7 334 aaKnown RBP12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 MAGIXQ9H6Y5 334 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 SIAEQ9HAT2 523 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 CCNB1IP1Q9NPC3 277 aa12.13□□□□□ -0.47
CTHRC1-201ENST00000330295 DUS4LO95620 317 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 SEMG1P04279 462 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 LMO1P25800 156 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 RPS6KA3P51812 740 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 ERVK-25P63136 954 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 TRAP1Q12931 704 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 ZNF404Q494X3 552 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 C10orf128Q5T292 105 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 OR2Z1Q8NG97 314 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 CCDC124Q96CT7 223 aaKnown RBP12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 ZNF570Q96NI8 536 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 CITED2Q99967 270 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 SEMA6AQ9H2E6 1030 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 GCM1Q9NP62 436 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 IL19Q9UHD0 177 aa12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 CAB39Q9Y376 341 aaPredicted RBP12.12□□□□□ -0.47
CTHRC1-201ENST00000330295 TNFRSF11BO00300 401 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 CDC42EP2O14613 210 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 TIMM8AO60220 97 aaPredicted RBP12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 ATP5HO75947 161 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 SLC6A6P31641 620 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 OMPP47874 163 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 ZNF133P52736 654 aaPredicted RBP12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 PCBD1P61457 104 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 MRPS34P82930 218 aaKnown RBP12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 HSF2Q03933 536 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 SGCAQ16586 387 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 SMARCD3Q6STE5 483 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 UNQ6126/PRO20091Q6UXV3 157 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 ZNF841Q6ZN19 808 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 DPY19L2P2Q6ZN68 376 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 LRRC75AQ8NAA5 344 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 Q8NFD4 153 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 GNPDA2Q8TDQ7 276 aa12.11□□□□□ -0.47
CTHRC1-201ENST00000330295 NSMAFQ92636 917 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms