RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FAHD2AQ96GK7 314 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 ZNF75AQ96N20 296 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 SELENOIQ9C0D9 397 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 BARX1Q9HBU1 254 aaPredicted RBP13.65□□□□□ -0.22
BRCC3-201ENST00000330045 TAS2R3Q9NYW6 316 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 SLC5A6Q9Y289 635 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 BDP1A6H8Y1 2624 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 LIPT2A6NK58 231 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 NUPL2O15504 423 aaKnown RBP13.65□□□□□ -0.22
BRCC3-201ENST00000330045 PIAS2O75928 621 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 PRKXP51817 358 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 AWAT2Q6E213 333 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 CFAP77Q6ZQR2 320 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 ANGPTL5Q86XS5 388 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 DTWD2Q8NBA8 298 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 OR10S1Q8NGN2 331 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 MAFAQ8NHW3 353 aaPredicted RBP13.65□□□□□ -0.22
BRCC3-201ENST00000330045 STT3BQ8TCJ2 826 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 CASTOR1Q8WTX7 329 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 PHYHIPLQ96FC7 376 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 NUDT22Q9BRQ3 303 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 SERINC1Q9NRX5 453 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 B3GALT5Q9Y2C3 310 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 KCNK7Q9Y2U2 307 aa13.65□□□□□ -0.22
BRCC3-201ENST00000330045 EXPH5Q8NEV8 1989 aa13.65□□□□□ -0.23
BRCC3-201ENST00000330045 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 OR2AT4A6NND4 320 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 SHISA8B8ZZ34 492 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 EFSO43281 561 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 IFNA6P05013 189 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 VAMP1P23763 118 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 ELP2Q6IA86 826 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 COX15Q7KZN9 410 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 ADAD2Q8NCV1 583 aaKnown RBP13.64□□□□□ -0.23
BRCC3-201ENST00000330045 OR10R2Q8NGX6 335 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 THAP6Q8TBB0 222 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 MESP1Q9BRJ9 268 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 SLC22A11Q9NSA0 550 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 ALKBH4Q9NXW9 302 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 SEMA5BQ9P283 1151 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 ATXN7L1Q9ULK2 861 aaPredicted RBP13.64□□□□□ -0.23
BRCC3-201ENST00000330045 UNC13CQ8NB66 2214 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 BCAT2O15382 392 aaPredicted RBP13.64□□□□□ -0.23
BRCC3-201ENST00000330045 AKR1C4P17516 323 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 CNR1P21554 472 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 LAP3P28838 519 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 ZNF93P35789 620 aaPredicted RBP13.64□□□□□ -0.23
BRCC3-201ENST00000330045 GSK3AP49840 483 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 FAM122CQ6P4D5 195 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 ATRAIDQ6UW56 229 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 KCTD9Q7L273 389 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 SLC25A45Q8N413 288 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 GAREM1Q9H706 876 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 FANCFQ9NPI8 374 aa13.64□□□□□ -0.23
BRCC3-201ENST00000330045 RPH3AQ9Y2J0 694 aaPredicted RBP13.64□□□□□ -0.23
BRCC3-201ENST00000330045 TMEM14DPA8MWL7 114 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 TBPP20226 339 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 ZNF529Q6P280 563 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 OR2W3Q7Z3T1 314 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 TMEM17Q86X19 198 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 ZNF101Q8IZC7 436 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 INO80EQ8NBZ0 244 aaPredicted RBP13.63□□□□□ -0.23
BRCC3-201ENST00000330045 OR52H1Q8NGJ2 320 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 OR51E1Q8TCB6 317 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 NUDT16L1Q9BRJ7 211 aaKnown RBP13.63□□□□□ -0.23
BRCC3-201ENST00000330045 SLC7A5P2Q9GIP4 190 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 KLHL13Q9P2N7 655 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 FBLN5Q9UBX5 448 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 EEF1E1-BLOC1S5C9J1V9 151 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 SSX5O60225 188 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 DUS4LO95620 317 aaKnown RBP13.63□□□□□ -0.23
BRCC3-201ENST00000330045 PMP2P02689 132 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 ZNF20P17024 532 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 CASRP41180 1078 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 SNTB1Q13884 538 aaKnown RBP13.63□□□□□ -0.23
BRCC3-201ENST00000330045 PAN3Q58A45 887 aaKnown RBP13.63□□□□□ -0.23
BRCC3-201ENST00000330045 THEM4Q5T1C6 240 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 NFAM1Q8NET5 270 aaPredicted RBP13.63□□□□□ -0.23
BRCC3-201ENST00000330045 DNASE2BQ8WZ79 361 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 MRPL13Q9BYD1 178 aaKnown RBP13.63□□□□□ -0.23
BRCC3-201ENST00000330045 TGIF2Q9GZN2 237 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 B3GAT1Q9P2W7 334 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 CACNA1EQ15878 2313 aa13.63□□□□□ -0.23
BRCC3-201ENST00000330045 A0A1W2PNV4 684 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 F5H0A9 414 aaPredicted RBP13.62□□□□□ -0.23
BRCC3-201ENST00000330045 SULT2B1O00204 365 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 TOR1AO14656 332 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 EFNA2O43921 213 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 GIMD1P0DJR0 217 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 GLB1P16278 677 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 EMP2P54851 167 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 ANKRD37Q7Z713 158 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 RTN4RL2Q86UN3 420 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 KMT5CQ86Y97 462 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 SPACA5Q96QH8 159 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 NICN1Q9BSH3 213 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 SEC61A2Q9H9S3 476 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 PISDQ9UG56 409 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 PI4KAP42356 2102 aa13.62□□□□□ -0.23
BRCC3-201ENST00000330045 ATP6V1G2-DDX39BF2Z307 99 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms